Gm22889 Gene Detail

Summary

• Symbol
  Gm22889
• Name
  predicted gene, 22889

• Feature Type
  snoRNA gene
• IDs
  MGI:5452666
  NCBI Gene: 115489608
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:127519590-127519647 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  24 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452666	snoRNA gene	Chr2:127519556-127519655 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039032	snoRNA gene	Chr2:130964067-130964124 (+)
A/J	MGP_AJ_G0039028	snoRNA gene	Chr2:125666421-125666478 (+)
AKR/J	MGP_AKRJ_G0038962	snoRNA gene	Chr2:129260033-129260090 (+)
BALB/cJ	MGP_BALBcJ_G0039011	snoRNA gene	Chr2:125933745-125933802 (+)
C3H/HeJ	MGP_C3HHeJ_G0038674	snoRNA gene	Chr2:129761224-129761281 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039561	snoRNA gene	Chr2:135075153-135075210 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036279	snoRNA gene	Chr2:120507791-120507848 (+)
CAST/EiJ	MGP_CASTEiJ_G0037815	snoRNA gene	Chr2:129961291-129961348 (+)
CBA/J	MGP_CBAJ_G0038645	snoRNA gene	Chr2:140070833-140070890 (+)
DBA/2J	MGP_DBA2J_G0038834	snoRNA gene	Chr2:125068196-125068253 (+)
FVB/NJ	MGP_FVBNJ_G0038786	snoRNA gene	Chr2:123723384-123723441 (+)
LP/J	MGP_LPJ_G0038874	snoRNA gene	Chr2:131216304-131216361 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038787	snoRNA gene	Chr2:144094896-144094953 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039661	snoRNA gene	Chr2:129274268-129274325 (+)
PWK/PhJ	MGP_PWKPhJ_G0037499	snoRNA gene	Chr2:124620702-124620759 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037253	snoRNA gene	Chr2:128354707-128354764 (+)
WSB/EiJ	MGP_WSBEiJ_G0038042	snoRNA gene	Chr2:130177589-130177646 (+)

Homology

• Gene Tree
  Gm22889
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000089264 (Evidence)
• NCBI Gene
  115489608

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000089264	Ensembl Gene Model | MGI Sequence Detail	58	C57BL/6J
transcript	ENSMUST00000158639	Ensembl | MGI Sequence Detail	58	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;