Gm22798 Gene Detail

Summary

• Symbol
  Gm22798
• Name
  predicted gene, 22798

• Feature Type
  snRNA gene
• IDs
  MGI:5452575
  NCBI Gene: 115489877
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:52630070-52630176 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  144 from dbSNP Build 142
• Strain Annotations
  24

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452575	snRNA gene	Chr3:52630070-52630176 (-)
129S1/SvImJ	ENSMUSG00200000405	snRNA gene	Chr3:49457566-49457672 (-)
A/J	ENSMUSG00195000829	snRNA gene	Chr3:49417990-49418096 (-)
AKR/J	ENSMUSG00220016001	snRNA gene	Chr3:49474539-49474645 (-)
BALB/cJ	ENSMUSG00180000410	snRNA gene	Chr3:49498526-49498632 (-)
C3H/HeJ	ENSMUSG00175002106	snRNA gene	Chr3:49332035-49332141 (-)
C3H/HeJ	ENSMUSG00175032192	snRNA gene	ChrX:65391747-65391853 (+)
C57BL/6NJ	ENSMUSG00215000656	snRNA gene	Chr3:49765524-49765630 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010233	snRNA gene	Chr3:49128949-49129055 (-)
CBA/J	ENSMUSG00210000818	snRNA gene	Chr3:49444179-49444285 (-)
DBA/2J	ENSMUSG00185000252	snRNA gene	Chr3:49681018-49681124 (-)
FVB/NJ	ENSMUSG00205009714	snRNA gene	Chr3:48661321-48661427 (-)
JF1/MsJ	ENSUMUG00000026346	snRNA gene	Chr3:49095404-49095510 (-)
LP/J	ENSMUSG00230005086	snRNA gene	Chr3:51630314-51630420 (-)
NOD/ShiLtJ	ENSMUSG00190000386	snRNA gene	Chr3:49807880-49807986 (-)
NZO/HlLtJ	ENSMUSG00225017741	snRNA gene	Chr3:54246417-54246523 (-)
PWK/PhJ	ENSLUMG00010010397	snRNA gene	Chr3:49256152-49256258 (-)
SPRET/EiJ	ENSMSPG00010008729	snRNA gene	Chr4:99318190-99318296 (+)
SPRET/EiJ	ENSMSPG00010028266	snRNA gene	Chr13:28800660-28800766 (-)
SPRET/EiJ	ENSMSPG00010007274	snRNA gene	Chr3:49931400-49931506 (-)
SPRET/EiJ	ENSMSPG00010048387	snRNA gene	Chr1:84119843-84119949 (-)
SPRET/EiJ	ENSMSPG00010044806	snRNA gene	Chr14:24152927-24153033 (+)
SPRET/EiJ	ENSMSPG00010012177	snRNA gene	Chr2:59995670-59995776 (-)
WSB/EiJ	ENSIUOG00005000603	snRNA gene	Chr3:49594865-49594971 (-)

Homology

• Gene Tree
  Gm22798
  

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  1

• Ensembl
  ENSMUSG00000119552 (Evidence)
• NCBI Gene
  115489877

Representative Sequences			Length	Strain/Species
genomic	115489877	NCBI Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	XR_004941772	RefSeq | MGI Sequence Detail	107	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;