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Snord138 Gene Detail
Summary
  • Symbol
    Snord138
  • Name
    small nucleolar RNA, C/D box 138
  • Synonyms
    Gm22574
Location &
Maps
more
  • Sequence Map
    Chr13:86193108-86193167 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    69 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5452351
 snoRNA gene Chr13:86193108-86193167 (-)
129S1/SvImJ MGP_129S1SvImJ_G0038718
 snoRNA gene Chr13:87005126-87005185 (-)
A/J MGP_AJ_G0038711
 snoRNA gene Chr13:83919102-83919161 (-)
AKR/J MGP_AKRJ_G0038646
 snoRNA gene Chr13:86415196-86415255 (-)
BALB/cJ MGP_BALBcJ_G0038696
 snoRNA gene Chr13:84497685-84497744 (-)
C3H/HeJ MGP_C3HHeJ_G0038358
 snoRNA gene Chr13:86106125-86106184 (-)
C57BL/6NJ MGP_C57BL6NJ_G0039241
 snoRNA gene Chr13:89753212-89753271 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0035990
 snoRNA gene Chr13:80169646-80169705 (-)
CAST/EiJ MGP_CASTEiJ_G0037499
 snoRNA gene Chr13:85256171-85256230 (-)
CBA/J MGP_CBAJ_G0038330
 snoRNA gene Chr13:93149667-93149726 (-)
DBA/2J MGP_DBA2J_G0038519
 snoRNA gene Chr13:83555779-83555838 (-)
FVB/NJ MGP_FVBNJ_G0038472
 snoRNA gene Chr13:82578942-82579001 (-)
LP/J MGP_LPJ_G0038558
 snoRNA gene Chr13:87243473-87243532 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0038470
 snoRNA gene Chr13:92608478-92608537 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0039344
 snoRNA gene Chr13:85796745-85796804 (-)
PWK/PhJ MGP_PWKPhJ_G0037185
 snoRNA gene Chr13:82443546-82443605 (-)
SPRET/EiJ MGP_SPRETEiJ_G0036942
 snoRNA gene Chr13:82138188-82138247 (-)
WSB/EiJ MGP_WSBEiJ_G0037729
 snoRNA gene Chr13:86274041-86274100 (-)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    707
  • Tissues
    1
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    21
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 115488275 NCBI Gene Model | MGI Sequence Detail 60 C57BL/6J ±  kb
transcript XR_004938345 RefSeq | MGI Sequence Detail 60 C57BL/6J  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    Other 1
References
more
  • Summaries
    All 5
    Developmental Gene Expression 1
  • Earliest
    J:319646 Chinnappa K, et al., Secondary loss of miR-3607 reduced cortical progenitor amplification during rodent evolution. Sci Adv. 2022 Jan 14;8(2):eabj4010
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory