About   Help   FAQ
Snord138 Gene Detail
Summary
  • Symbol
    Snord138
  • Name
    small nucleolar RNA, C/D box 138
  • Synonyms
    Gm22574
Location &
Maps
more
  • Sequence Map
    Chr13:86193108-86193167 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    165 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5452351
 snoRNA gene Chr13:86193108-86193167 (-)
129S1/SvImJ ENSMUSG00200006268
 unclassified gene Chr13:80682364-80682423 (-)
A/J ENSMUSG00195024126
 unclassified gene Chr13:81224158-81224217 (-)
AKR/J ENSMUSG00220016876
 unclassified gene Chr13:79858278-79858337 (+)
BALB/cJ ENSMUSG00180016286
 unclassified gene Chr13:81698215-81698274 (-)
C3H/HeJ ENSMUSG00175024191
 unclassified gene Chr13:81905051-81905110 (-)
C57BL/6NJ ENSMUSG00215003012
 unclassified gene Chr13:81774810-81774869 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0035990
 snoRNA gene Chr13:80169646-80169705 (-)
CAST/EiJ ENSTCUG00005010039
 unclassified gene Chr13:81069550-81069609 (-)
CBA/J ENSMUSG00210024771
 unclassified gene Chr13:81179890-81179949 (-)
DBA/2J ENSMUSG00185010190
 unclassified gene Chr13:84871688-84871747 (-)
FVB/NJ ENSMUSG00205008455
 unclassified gene Chr13:80624622-80624681 (-)
JF1/MsJ ENSUMUG00000021369
 unclassified gene Chr13:84600408-84600467 (-)
LP/J no annotation
NOD/ShiLtJ ENSMUSG00190019065
 unclassified gene Chr13:81527443-81527502 (-)
NZO/HlLtJ no annotation
PWK/PhJ ENSLUMG00010011564
 unclassified gene Chr13:80731048-80731107 (-)
SPRET/EiJ ENSMSPG00010006751
 unclassified gene Chr13:81874726-81874785 (-)
WSB/EiJ ENSIUOG00005031684
 unclassified gene Chr13:80537246-80537305 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    598
  • Tissues
    1
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    20
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 115488275 NCBI Gene Model | MGI Sequence Detail 60 C57BL/6J ±  kb
transcript XR_004938345 RefSeq | MGI Sequence Detail 60 C57BL/6J  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    Other 1
Other
Accession IDs
less
MGI:7256360
References
more
  • Summaries
    All 6
    Developmental Gene Expression 1
  • Earliest
    J:319646 Chinnappa K, et al., Secondary loss of miR-3607 reduced cortical progenitor amplification during rodent evolution. Sci Adv. 2022 Jan 14;8(2):eabj4010
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory