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Mir5621 Gene Detail
Summary
  • Symbol
    Mir5621
  • Name
    microRNA 5621
  • Synonyms
    mmu-mir-5621
Location &
Maps
more
  • Sequence Map
    Chr11:115686650-115686712 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    70 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5452341
 miRNA gene Chr11:115686650-115686712 (+)
129S1/SvImJ ENSMUSG00200052508
 miRNA gene Chr11:113050708-113050770 (+)
A/J ENSMUSG00195031846
 miRNA gene Chr11:112755568-112755630 (+)
AKR/J ENSMUSG00220031079
 miRNA gene Chr11:112862007-112862069 (+)
BALB/cJ ENSMUSG00180052790
 miRNA gene Chr11:113054572-113054634 (+)
C3H/HeJ ENSMUSG00175047170
 miRNA gene Chr11:113007399-113007461 (+)
C57BL/6NJ ENSMUSG00215047700
 miRNA gene Chr11:112546739-112546801 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0007183
 miRNA gene Chr11:111643345-111643407 (+)
CAST/EiJ ENSTCUG00005042260
 miRNA gene Chr11:112411485-112411547 (+)
CBA/J ENSMUSG00210050855
 miRNA gene Chr11:112727385-112727447 (+)
DBA/2J ENSMUSG00185027379
 miRNA gene Chr11:113046140-113046202 (+)
FVB/NJ ENSMUSG00205047487
 miRNA gene Chr11:112849357-112849419 (+)
JF1/MsJ ENSUMUG00000054543
 miRNA gene Chr11:113309372-113309434 (+)
LP/J ENSMUSG00230050951
 miRNA gene Chr11:114100736-114100798 (+)
NOD/ShiLtJ ENSMUSG00190049096
 miRNA gene Chr11:113075173-113075235 (+)
NZO/HlLtJ ENSMUSG00225053792
 miRNA gene Chr11:116153308-116153370 (+)
PWK/PhJ ENSLUMG00010025054
 miRNA gene Chr11:112829564-112829626 (+)
SPRET/EiJ ENSMSPG00010043003
 miRNA gene Chr11:113345868-113345925 (+)
WSB/EiJ ENSIUOG00005048423
 miRNA gene Chr11:112817103-112817165 (+)



Homology
less
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
    1
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100885833 NCBI Gene Model | MGI Sequence Detail 63 C57BL/6J ±  kb
transcript NR_049194 RefSeq | MGI Sequence Detail 63 ZRU/MplStud  
For the selected sequence
Other Database
Links
less
miRBase MI0019189
References
more
  • Summaries
    All 6
    Gene Ontology 1
  • Earliest
    J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
  • Latest
    J:228158 Li J, et al., MiR-154-5p regulates osteogenic differentiation of adipose-derived mesenchymal stem cells under tensile stress through the Wnt/PCP pathway by targeting Wnt11. Bone. 2015 Sep;78:130-41
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory