Gm22497 Gene Detail

Summary

• Symbol
  Gm22497
• Name
  predicted gene, 22497

• Feature Type
  snoRNA gene
• IDs
  MGI:5452274
  NCBI Gene: 115486261
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:109394236-109394366 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  12 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452274	snoRNA gene	Chr4:109394236-109394366 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039211	snoRNA gene	Chr4:110313441-110313571 (+)
A/J	MGP_AJ_G0039207	snoRNA gene	Chr4:106344570-106344700 (+)
AKR/J	MGP_AKRJ_G0039137	snoRNA gene	Chr4:108994419-108994549 (+)
BALB/cJ	MGP_BALBcJ_G0039190	snoRNA gene	Chr4:106558444-106558574 (+)
C3H/HeJ	MGP_C3HHeJ_G0038851	snoRNA gene	Chr4:109748199-109748329 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039738	snoRNA gene	Chr4:114275288-114275418 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036436	snoRNA gene	Chr4:101640514-101640644 (+)
CAST/EiJ	MGP_CASTEiJ_G0037984	snoRNA gene	Chr4:107598051-107598181 (+)
CBA/J	MGP_CBAJ_G0038822	snoRNA gene	Chr4:118044847-118044977 (+)
DBA/2J	MGP_DBA2J_G0039007	snoRNA gene	Chr4:105963857-105963987 (+)
FVB/NJ	MGP_FVBNJ_G0038962	snoRNA gene	Chr4:104839528-104839658 (+)
LP/J	MGP_LPJ_G0039051	snoRNA gene	Chr4:110587643-110587773 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038963	snoRNA gene	Chr4:123213318-123213448 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039837	snoRNA gene	Chr4:109233316-109233446 (+)
PWK/PhJ	MGP_PWKPhJ_G0037671	snoRNA gene	Chr4:104259791-104259921 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037419	snoRNA gene	Chr4:106619751-106619881 (+)
WSB/EiJ	MGP_WSBEiJ_G0038213	snoRNA gene	Chr4:109417466-109417596 (+)

Homology

• Gene Tree
  Gm22497
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm22497
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000077687 (Evidence)
• NCBI Gene
  115486261

Representative Sequences			Length	Strain/Species
genomic	115486261	NCBI Gene Model | MGI Sequence Detail	131	C57BL/6J
transcript	XR_004942366	RefSeq | MGI Sequence Detail	131	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
• Latest
  J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12