Gm22288 Gene Detail

Summary

• Symbol
  Gm22288
• Name
  predicted gene, 22288

• Feature Type
  snRNA gene
• IDs
  MGI:5452065
  NCBI Gene: 115489273
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:49494690-49494796 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452065	snRNA gene	ChrX:49494690-49494796 (+)
129S1/SvImJ	ENSMUSG00200037947	snRNA gene	ChrX:33336629-33336735 (+)
A/J	ENSMUSG00195017439	snRNA gene	ChrX:36141413-36141519 (+)
AKR/J	ENSMUSG00220040372	snRNA gene	ChrX:33000890-33000996 (+)
BALB/cJ	ENSMUSG00180036073	snRNA gene	ChrX:33855954-33856060 (+)
C3H/HeJ	ENSMUSG00175043897	snRNA gene	ChrX:36875305-36875411 (+)
C57BL/6NJ	ENSMUSG00215048620	snRNA gene	ChrX:33881902-33882008 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005039660	snRNA gene	ChrX:35853262-35853368 (+)
CBA/J	ENSMUSG00210040766	snRNA gene	ChrX:34118062-34118168 (+)
DBA/2J	ENSMUSG00185034010	snRNA gene	ChrX:44823828-44823934 (+)
FVB/NJ	ENSMUSG00205035460	snRNA gene	ChrX:32477818-32477924 (+)
JF1/MsJ	ENSUMUG00000031841	snRNA gene	ChrX:63860921-63861026 (+)
LP/J	ENSMUSG00230029789	snRNA gene	ChrX:51356733-51356839 (+)
NOD/ShiLtJ	ENSMUSG00190038332	snRNA gene	ChrX:33217302-33217408 (+)
NZO/HlLtJ	ENSMUSG00225043482	snRNA gene	ChrX:56550367-56550473 (+)
PWK/PhJ	ENSLUMG00010043141	snRNA gene	ChrX:33547647-33547752 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005048577	snRNA gene	ChrX:34361497-34361603 (+)

Homology

• Gene Tree
  Gm22288
  

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000119917 (Evidence)
• NCBI Gene
  115489273

Representative Sequences			Length	Strain/Species
genomic	115489273	NCBI Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	XR_004940583	RefSeq | MGI Sequence Detail	107	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;