Gm22279 Gene Detail

Summary

• Symbol
  Gm22279
• Name
  predicted gene, 22279

• Feature Type
  snRNA gene
  BioType Conflict
  
• IDs
  MGI:5452056
  NCBI Gene: 115489804
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:65433122-65433214 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  9 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452056	snRNA gene	Chr3:65433114-65433214 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037810	snRNA gene	Chr3:64638130-64638222 (+)
A/J	MGP_AJ_G0037799	snRNA gene	Chr3:62767542-62767634 (+)
AKR/J	MGP_AKRJ_G0037736	snRNA gene	Chr3:64040505-64040597 (+)
BALB/cJ	MGP_BALBcJ_G0037779	snRNA gene	Chr3:62588741-62588833 (+)
C3H/HeJ	MGP_C3HHeJ_G0037454	snRNA gene	Chr3:64339505-64339597 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038308	snRNA gene	Chr3:67080782-67080874 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035211	snRNA gene	Chr3:59158223-59158315 (+)
CAST/EiJ	MGP_CASTEiJ_G0036616	snRNA gene	Chr3:64281614-64281706 (+)
CBA/J	MGP_CBAJ_G0037428	snRNA gene	Chr3:69151470-69151562 (+)
DBA/2J	MGP_DBA2J_G0037609	snRNA gene	Chr3:62263804-62263896 (+)
FVB/NJ	MGP_FVBNJ_G0037558	snRNA gene	Chr3:60913197-60913289 (+)
LP/J	MGP_LPJ_G0037662	snRNA gene	Chr3:65551996-65552088 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037572	snRNA gene	Chr3:73763297-73763389 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038419	snRNA gene	Chr3:63955390-63955482 (+)
PWK/PhJ	MGP_PWKPhJ_G0036311	snRNA gene	Chr3:62011272-62011364 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036093	snRNA gene	Chr3:63162866-63162958 (+)
WSB/EiJ	MGP_WSBEiJ_G0036831	snRNA gene	Chr3:64082760-64082852 (+)

Homology

• Gene Tree
  Gm22279
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000087825 (Evidence)
• NCBI Gene
  115489804

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000087825	Ensembl Gene Model | MGI Sequence Detail	93	C57BL/6J
transcript	ENSMUST00000157200	Ensembl | MGI Sequence Detail	93	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;