Gm22146 Gene Detail

Summary

• Symbol
  Gm22146
• Name
  predicted gene, 22146

• Feature Type
  lncRNA gene
• IDs
  MGI:5451923
  NCBI Gene: 102639006
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:28664969-28674579 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  260 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5451923	lncRNA gene	Chr17:28664969-28675431 (+)
129S1/SvImJ	ENSMUSG00200054096	lncRNA gene	Chr17:24323541-24333727 (+)
A/J	ENSMUSG00195054522	lncRNA gene	Chr17:25139915-25150100 (+)
AKR/J	ENSMUSG00220054002	lncRNA gene	Chr17:24187548-24197734 (+)
BALB/cJ	ENSMUSG00180050394	lncRNA gene	Chr17:24626010-24636197 (+)
C3H/HeJ	ENSMUSG00175054133	lncRNA gene	Chr17:24175967-24186152 (+)
C57BL/6NJ	ENSMUSG00215054650	lncRNA gene	Chr17:24176226-24186184 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005050813	lncRNA gene	Chr17:24919853-24929794 (+)
CBA/J	ENSMUSG00210051311	lncRNA gene	Chr17:24014413-24024598 (+)
DBA/2J	ENSMUSG00185055371	lncRNA gene	Chr17:26229424-26239609 (+)
FVB/NJ	ENSMUSG00205053227	lncRNA gene	Chr17:24490923-24501109 (+)
JF1/MsJ	ENSUMUG00000057780	lncRNA gene	Chr17:25693133-25703233 (+)
LP/J	ENSMUSG00230055202	lncRNA gene	Chr17:27749355-27759540 (+)
NOD/ShiLtJ	ENSMUSG00190054095	lncRNA gene	Chr17:24123308-24133493 (+)
NZO/HlLtJ	ENSMUSG00225054537	lncRNA gene	Chr17:29717523-29727480 (+)
PWK/PhJ	ENSLUMG00010053504	lncRNA gene	Chr17:23616405-23626536 (+)
SPRET/EiJ	ENSMSPG00010049908	lncRNA gene	Chr17:24905243-24916266 (+)
WSB/EiJ	ENSIUOG00005052197	lncRNA gene	Chr17:24884025-24893983 (+)

Homology

• Gene Tree
  Gm22146
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  4
• Gene trapped
  4
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  2

• Ensembl
  ENSMUSG00000117084 (Evidence)
• NCBI Gene
  102639006

Representative Sequences			Length	Strain/Species
genomic	102639006	NCBI Gene Model | MGI Sequence Detail	9611	C57BL/6J
transcript	XR_390111	RefSeq | MGI Sequence Detail	4248	C57BL/6J

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;