Gm22138 Gene Detail

Summary

• Symbol
  Gm22138
• Name
  predicted gene, 22138

• Feature Type
  snoRNA gene
• IDs
  MGI:5451915
  NCBI Gene: 115485720
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:86585872-86585999 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  68 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5451915	snoRNA gene	Chr9:86585872-86585999 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039544	snoRNA gene	Chr9:87549848-87549975 (+)
A/J	MGP_AJ_G0039546	snoRNA gene	Chr9:84491964-84492091 (+)
AKR/J	MGP_AKRJ_G0039469	snoRNA gene	Chr9:86501115-86501242 (+)
BALB/cJ	MGP_BALBcJ_G0039524	snoRNA gene	Chr9:84135135-84135262 (+)
C3H/HeJ	MGP_C3HHeJ_G0039184	snoRNA gene	Chr9:86960652-86960779 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040075	snoRNA gene	Chr9:89912076-89912203 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038312	snoRNA gene	Chr9:87426146-87426273 (+)
CBA/J	MGP_CBAJ_G0039151	snoRNA gene	Chr9:93078188-93078315 (+)
DBA/2J	MGP_DBA2J_G0039342	snoRNA gene	Chr9:84050585-84050712 (+)
FVB/NJ	MGP_FVBNJ_G0039299	snoRNA gene	Chr9:83135450-83135577 (+)
LP/J	MGP_LPJ_G0039385	snoRNA gene	Chr9:87761159-87761286 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039302	snoRNA gene	Chr9:94690459-94690586 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040173	snoRNA gene	Chr9:86605914-86606041 (+)
PWK/PhJ	MGP_PWKPhJ_G0037986	snoRNA gene	Chr9:84217784-84217911 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037738	snoRNA gene	Chr9:86801803-86801930 (+)
WSB/EiJ	MGP_WSBEiJ_G0038537	snoRNA gene	Chr9:86642185-86642312 (+)

Homology

• Gene Tree
  Gm22138
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000089373 (Evidence)
• NCBI Gene
  115485720

Representative Sequences			Length	Strain/Species
genomic	115485720	NCBI Gene Model | MGI Sequence Detail	128	C57BL/6J
transcript	XR_004935960	RefSeq | MGI Sequence Detail	128	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;