DQ267101 MGI Mouse Gene Detail - MGI:5439874

Sequence Map

Chr12:109617858-109617929 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5439874	snoRNA gene	Chr12:109617858-109617930 (+)
129S1/SvImJ	ENSMUSG00200025921	snoRNA gene	Chr12:101391617-101391689 (+)
A/J	ENSMUSG00195048101	snoRNA gene	Chr12:103923275-103923347 (+)
AKR/J	ENSMUSG00220045297	snoRNA gene	Chr12:101805922-101805994 (+)
BALB/cJ	ENSMUSG00180051211	snoRNA gene	Chr12:103154770-103154842 (+)
C3H/HeJ	ENSMUSG00175041259	snoRNA gene	Chr12:105733873-105733945 (+)
C57BL/6NJ	ENSMUSG00215051194	snoRNA gene	Chr12:102427722-102427794 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035947	snoRNA gene	Chr12:104100674-104100746 (+)
CAST/EiJ	ENSTCUG00005019658	snoRNA gene	Chr12:101905921-101905993 (+)
CBA/J	ENSMUSG00210034874	snoRNA gene	Chr12:102795328-102795400 (+)
DBA/2J	ENSMUSG00185028501	snoRNA gene	Chr12:104613983-104614055 (+)
FVB/NJ	ENSMUSG00205040259	snoRNA gene	Chr12:101839631-101839703 (+)
JF1/MsJ	ENSUMUG00000024731	snoRNA gene	Chr12:109371718-109371790 (+)
LP/J	ENSMUSG00230031591	snoRNA gene	Chr12:111656511-111656583 (+)
NOD/ShiLtJ	ENSMUSG00190030214	snoRNA gene	Chr12:83383586-83383658 (-)
NZO/HlLtJ	ENSMUSG00225039384	snoRNA gene	Chr12:113415379-113415451 (+)
PWK/PhJ	ENSLUMG00010044901	snoRNA gene	Chr12:102844165-102844237 (+)
SPRET/EiJ	ENSMSPG00010019709	snoRNA gene	Chr12:105127033-105127105 (+)
WSB/EiJ	ENSIUOG00005009768	snoRNA gene	Chr12:101837080-101837152 (+)

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Molecular Function

carbohydrate derivative binding	cytoskeletal protein binding	DNA binding	enzyme regulator	hydrolase	ligase	lipid binding	oxidoreductase	RNA binding	signaling receptor activity	signaling receptor binding	transcription	transferase	transporter

Biological Process

carbohydrate derivative metabolism	cell differentiation	cell population proliferation	cellular component organization	DNA-templated transcription	establishment of localization	homeostatic process	immune system process	lipid metabolic process	programmed cell death	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	membraneless organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	100861571	NCBI Gene Model \| MGI Sequence Detail	72	C57BL/6J	± kb
	transcript	NR_046305	RefSeq \| MGI Sequence Detail	72	Kunming

Summaries

All 6

Gene Ontology 1
Earliest

J:104984 Xiao Y, et al., Characterization of three novel imprinted snoRNAs from mouse Irm gene. Biochem Biophys Res Commun. 2006 Feb 24;340(4):1217-23

TSS for DQ267101:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr115169	Chr12:109617411-109617431 (+)	-437 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 09/08/2026 MGI 6.24