Gm21269 Gene Detail

Summary

• Symbol
  Gm21269
• Name
  predicted gene, 21269

• Feature Type
  lncRNA gene
• IDs
  MGI:5434624
  NCBI Gene: 100861851
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:73475672-73486297 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  111 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5434624	lncRNA gene	Chr7:73466294-73488646 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007213	lincRNA gene	Chr7:75411888-75422279 (+)
A/J	MGP_AJ_G0007210	lincRNA gene	Chr7:73704160-73714872 (+)
AKR/J	MGP_AKRJ_G0007180	lincRNA gene	Chr7:75261812-75272101 (+)
BALB/cJ	MGP_BALBcJ_G0007188	lincRNA gene	Chr7:73453520-73464360 (+)
C3H/HeJ	MGP_C3HHeJ_G0007132	lincRNA gene	Chr7:76018073-76028143 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007358	lincRNA gene	Chr7:78514021-78523904 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006566	lincRNA gene	Chr7:76341865-76352501 (+)
CAST/EiJ	MGP_CASTEiJ_G0007034	lincRNA gene	Chr7:66858350-66869385 (+)
CBA/J	MGP_CBAJ_G0007115	lincRNA gene	Chr7:81078495-81088875 (+)
DBA/2J	MGP_DBA2J_G0007136	lincRNA gene	Chr7:72368908-72379061 (+)
FVB/NJ	MGP_FVBNJ_G0007159	lincRNA gene	Chr7:72419284-72429439 (+)
LP/J	MGP_LPJ_G0007218	lincRNA gene	Chr7:76628459-76641235 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007135	lincRNA gene	Chr7:81224381-81234725 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007361	lincRNA gene	Chr7:74725523-74735933 (+)
PWK/PhJ	MGP_PWKPhJ_G0006977	lincRNA gene	Chr7:65533161-65543908 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0006885	lincRNA gene	Chr7:61807158-61817877 (+)
WSB/EiJ	MGP_WSBEiJ_G0007095	lincRNA gene	Chr7:75075041-75085062 (+)

Homology

• Gene Tree
  Gm21269
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  11 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  2
• Genomic Mutations
  3 involving Gm21269
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  30
• RefSeq
  1

• Ensembl
  ENSMUSG00000108448 (Evidence)
• NCBI Gene
  100861851

Representative Sequences			Length	Strain/Species
genomic	100861851	NCBI Gene Model | MGI Sequence Detail	10626	C57BL/6J
transcript	NR_102375	RefSeq | MGI Sequence Detail	729	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 15

  Phenotypes 11
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67