Gm21269 Gene Detail

Summary

• Symbol
  Gm21269
• Name
  predicted gene, 21269

• Feature Type
  lncRNA gene
• IDs
  MGI:5434624
  NCBI Gene: 100861851
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:73475672-73486297 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  369 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5434624	lncRNA gene	Chr7:73466294-73488775 (+)
129S1/SvImJ	ENSMUSG00200012361	lncRNA gene	Chr7:60232039-60254445 (+)
A/J	ENSMUSG00195014269	lncRNA gene	Chr7:64626251-64648656 (+)
AKR/J	ENSMUSG00220020713	lncRNA gene	Chr7:58172664-58195075 (+)
BALB/cJ	ENSMUSG00180013591	lncRNA gene	Chr7:61335333-61357744 (+)
C3H/HeJ	ENSMUSG00175021683	lncRNA gene	Chr7:62133106-62155514 (+)
C57BL/6NJ	ENSMUSG00215030400	lncRNA gene	Chr7:61267280-61289634 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006566	lincRNA gene	Chr7:76341865-76352501 (+)
CAST/EiJ	ENSTCUG00005004464	lncRNA gene	Chr7:64758505-64780889 (+)
CBA/J	ENSMUSG00210023941	lncRNA gene	Chr7:61991815-62014212 (+)
DBA/2J	ENSMUSG00185001408	lncRNA gene	Chr7:66314547-66336946 (+)
FVB/NJ	ENSMUSG00205027668	lncRNA gene	Chr7:61973453-61995826 (+)
JF1/MsJ	ENSUMUG00000027455	lncRNA gene	Chr7:71043592-71065911 (+)
LP/J	ENSMUSG00230015609	lncRNA gene	Chr7:72369239-72391643 (+)
NOD/ShiLtJ	ENSMUSG00190020263	lncRNA gene	Chr7:62086984-62109365 (+)
NZO/HlLtJ	ENSMUSG00225042982	lncRNA gene	Chr7:70637189-70659582 (+)
PWK/PhJ	ENSLUMG00010017559	lncRNA gene	Chr7:60585782-60608090 (+)
SPRET/EiJ	ENSMSPG00010024167	lncRNA gene	Chr7:61013337-61035735 (+)
WSB/EiJ	ENSIUOG00005021933	lncRNA gene	Chr7:62461576-62483932 (+)

Homology

• Gene Tree
  Gm21269
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  11 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  2
• Genomic Mutations
  3 involving Gm21269
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  36
• RefSeq
  1

• Ensembl
  ENSMUSG00000108448 (Evidence)
• NCBI Gene
  100861851

Representative Sequences			Length	Strain/Species
genomic	100861851	NCBI Gene Model | MGI Sequence Detail	10626	C57BL/6J
transcript	NR_102375	RefSeq | MGI Sequence Detail	729	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 16

  Phenotypes 11
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67