Gm21232 Pseudogene Detail

Summary

• Symbol
  Gm21232
• Name
  predicted gene, 21232

• Feature Type
  pseudogene
• IDs
  MGI:5434587
  NCBI Gene: 100861806
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:87931090-87932095 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  204 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5434587	pseudogene	Chr13:87931090-87932095 (+)
129S1/SvImJ	ENSMUSG00200008980	pseudogene	Chr13:82398713-82399718 (+)
A/J	ENSMUSG00195024182	pseudogene	Chr13:82935791-82936796 (+)
AKR/J	ENSMUSG00220014087	pseudogene	Chr13:81413792-81414797 (+)
BALB/cJ	ENSMUSG00180016153	pseudogene	Chr13:83431897-83432902 (+)
C3H/HeJ	ENSMUSG00175023438	pseudogene	Chr13:83632417-83633422 (+)
C57BL/6NJ	ENSMUSG00215003024	pseudogene	Chr13:83518488-83519493 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009896	pseudogene	Chr13:81757172-81758172 (+)
CAST/EiJ	ENSTCUG00005009546	pseudogene	Chr13:82722349-82723354 (+)
CBA/J	ENSMUSG00210024723	pseudogene	Chr13:82907177-82908182 (+)
DBA/2J	ENSMUSG00185010049	pseudogene	Chr13:86598974-86599979 (+)
FVB/NJ	ENSMUSG00205008619	pseudogene	Chr13:82358335-82359340 (+)
JF1/MsJ	ENSUMUG00000022853	pseudogene	Chr13:86283396-86284401 (+)
LP/J	ENSMUSG00230004435	pseudogene	Chr13:96629298-96630303 (+)
NOD/ShiLtJ	ENSMUSG00190018745	pseudogene	Chr13:83273099-83274104 (+)
NZO/HlLtJ	ENSMUSG00225030630	pseudogene	Chr13:89146543-89147548 (+)
PWK/PhJ	ENSLUMG00010012132	pseudogene	Chr13:82376963-82377968 (+)
SPRET/EiJ	ENSMSPG00010006692	pseudogene	Chr13:83614675-83615680 (+)
WSB/EiJ	ENSIUOG00005031529	pseudogene	Chr13:82286004-82287009 (+)

Homology

• Gene Tree
  Gm21232
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm21232
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000098011 (Evidence)
• NCBI Gene
  100861806

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098011	Ensembl Gene Model | MGI Sequence Detail	1006	C57BL/6J
transcript	ENSMUST00000182187	Ensembl | MGI Sequence Detail	1006	Not Applicable

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69