Gm21221 Gene Detail

Summary

• Symbol
  Gm21221
• Name
  predicted gene, 21221

• Feature Type
  lncRNA gene
• IDs
  MGI:5434576
  NCBI Gene: 100861794
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:149725455-149735216 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  210 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5434576	lncRNA gene	Chr5:149725444-149755636 (-)
129S1/SvImJ	ENSMUSG00200011594	lncRNA gene	Chr5:143568079-143577817 (-)
A/J	ENSMUSG00195005225	lncRNA gene	Chr5:143176623-143186366 (-)
AKR/J	ENSMUSG00220015427	lncRNA gene	Chr5:142178797-142188540 (-)
BALB/cJ	ENSMUSG00180003288	lncRNA gene	Chr5:143578967-143588712 (-)
C3H/HeJ	ENSMUSG00175012531	lncRNA gene	Chr5:145419751-145429494 (-)
C57BL/6NJ	ENSMUSG00215000133	lncRNA gene	Chr5:143116764-143126523 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006264	lincRNA gene	Chr5:143364480-143374250 (-)
CAST/EiJ	ENSTCUG00005010332	lncRNA gene	Chr5:142698843-142708584 (-)
CBA/J	ENSMUSG00210000945	lncRNA gene	Chr5:144306856-144316617 (-)
DBA/2J	ENSMUSG00185042552	lncRNA gene	Chr5:147276991-147286754 (-)
FVB/NJ	ENSMUSG00205000163	lncRNA gene	Chr5:142957830-142967574 (-)
JF1/MsJ	ENSUMUG00000053807	lncRNA gene	Chr5:149769621-149779341 (-)
LP/J	ENSMUSG00230029879	lncRNA gene	Chr5:151284720-151294461 (-)
NOD/ShiLtJ	ENSMUSG00190006040	lncRNA gene	Chr5:142931922-142941663 (-)
NZO/HlLtJ	ENSMUSG00225009351	lncRNA gene	Chr5:159022773-159032534 (-)
PWK/PhJ	ENSLUMG00010000436	lncRNA gene	Chr5:142041616-142051315 (-)
SPRET/EiJ	ENSMSPG00010007109	lncRNA gene	Chr5:144823456-144833335 (-)
WSB/EiJ	ENSIUOG00005014271	lncRNA gene	Chr5:145701875-145711626 (-)

Homology

• Gene Tree
  Gm21221
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  40
• RefSeq
  1

• Ensembl
  ENSMUSG00000106740 (Evidence)
• NCBI Gene
  100861794

Representative Sequences			Length	Strain/Species
genomic	100861794	NCBI Gene Model | MGI Sequence Detail	9762	C57BL/6J
transcript	NR_077242	RefSeq | MGI Sequence Detail	1073	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm21221:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr54654	Chr5:149726013-149726039 (-)	9,190 bp