Gm21168 Pseudogene Detail

Summary

• Symbol
  Gm21168
• Name
  predicted gene, 21168

• Feature Type
  pseudogene
• IDs
  MGI:5434523
  NCBI Gene: 100861728
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:26161624-26162719 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  67 from dbSNP Build 142
• Strain Annotations
  8

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5434523	pseudogene	Chr5:26161624-26162719 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	ENSMUSG00175048427	pseudogene	Chr5:23012650-23012841 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0008990	pseudogene	Chr1:5705425-5706510 (+)
CAST/EiJ	ENSTCUG00005025598	pseudogene	Chr5:21254893-21256041 (+)
CBA/J	no annotation
DBA/2J	ENSMUSG00185039269	pseudogene	Chr5:23713757-23714852 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000008041	pseudogene	Chr5:28311895-28312990 (+)
JF1/MsJ	ENSUMUG00000007813	pseudogene	Chr5:28219792-28220887 (+)
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225020441	pseudogene	Chr5:33567086-33568181 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm21168
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  11 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  2
• Radiation induced
  2
• Spontaneous
  1
• Genomic Mutations
  5 involving Gm21168
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  10

• Ensembl
  ENSMUSG00000104651 (Evidence)
• NCBI Gene
  100861728

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104651	Ensembl Gene Model | MGI Sequence Detail	1096	C57BL/6J
transcript	ENSMUST00000199646	Ensembl | MGI Sequence Detail	1096	Not Applicable

References

• Summaries
  All 15

  Diseases 1

  Phenotypes 11
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:119563 Alt B, et al., Arteries define the position of the thyroid gland during its developmental relocalisation. Development. 2006 Oct;133(19):3797-804