Gm21136 Pseudogene Detail

Summary

• Symbol
  Gm21136
• Name
  predicted gene, 21136

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:5434491
  NCBI Gene: 100861686
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:38563621-38567424 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  50 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5434491	pseudogene	Chr7:38563537-38569222 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	ENSMUSG00175038423	pseudogene	Chr7:23218529-23222331 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005047749	pseudogene	Chr7:31895418-31899430 (+)
CBA/J	no annotation
DBA/2J	ENSMUSG00185048821	pseudogene	Chr7:31251759-31255562 (-)
DBA/2J	ENSMUSG00185051497	pseudogene	Chr7:30978082-30981887 (-)
FVB/NJ	ENSMUSG00205023961	pseudogene	Chr7:27654749-27658543 (-)
JF1/MsJ	ENSUMUG00000039282	pseudogene	Chr7:35450783-35454588 (-)
JF1/MsJ	ENSUMUG00000037227	pseudogene	Chr7:35724716-35728519 (-)
LP/J	ENSMUSG00230016676	pseudogene	Chr7:37234320-37238120 (-)
LP/J	ENSMUSG00230016545	pseudogene	Chr7:37073291-37077095 (-)
LP/J	ENSMUSG00230016668	pseudogene	Chr7:36575771-36579576 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225009556	pseudogene	Chr7:35287485-35291288 (-)
NZO/HlLtJ	ENSMUSG00225010675	pseudogene	Chr7:35013792-35017597 (-)
PWK/PhJ	ENSLUMG00010022061	pseudogene	Chr7:28906837-28910642 (+)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm21136
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  4

• Ensembl
  ENSMUSG00000099981 (Evidence)
• NCBI Gene
  100861686

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099981	Ensembl Gene Model | MGI Sequence Detail	3804	C57BL/6J
transcript	ENSMUST00000186812	Ensembl | MGI Sequence Detail	2575	Not Applicable
polypeptide	XP_003688882	RefSeq | MGI Sequence Detail	858	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;