Gm21018 Pseudogene Detail

Summary

• Symbol
  Gm21018
• Name
  predicted gene, 21018

• Feature Type
  pseudogene
• IDs
  MGI:5434373
  NCBI Gene: 100534295
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:93025313-93026500 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  220 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5434373	pseudogene	Chr17:93025313-93026504 (-)
129S1/SvImJ	ENSMUSG00200022902	pseudogene	Chr17:88444288-88445479 (-)
A/J	ENSMUSG00195030410	pseudogene	Chr17:89852970-89854161 (-)
AKR/J	ENSMUSG00220016524	pseudogene	Chr17:88828290-88829481 (-)
BALB/cJ	ENSMUSG00180027581	pseudogene	Chr17:89528397-89529588 (-)
C3H/HeJ	ENSMUSG00175006980	pseudogene	Chr17:88755255-88756446 (-)
C57BL/6NJ	ENSMUSG00215017701	pseudogene	Chr17:88476778-88477969 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011770	pseudogene	Chr17:89335006-89336197 (-)
CBA/J	ENSMUSG00210022293	pseudogene	Chr17:88654194-88655385 (-)
DBA/2J	ENSMUSG00185020794	pseudogene	Chr17:91394909-91396100 (-)
FVB/NJ	ENSMUSG00205006084	pseudogene	Chr17:89229134-89230325 (-)
JF1/MsJ	ENSUMUG00000016325	pseudogene	Chr17:91224102-91225293 (-)
LP/J	ENSMUSG00230010967	pseudogene	Chr17:92437204-92438395 (-)
NOD/ShiLtJ	ENSMUSG00190010121	pseudogene	Chr17:88537381-88538572 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010031957	pseudogene	Chr17:88393120-88394315 (-)
SPRET/EiJ	ENSMSPG00010021782	pseudogene	Chr17:89055046-89056235 (-)
WSB/EiJ	ENSIUOG00005023059	pseudogene	Chr17:89421489-89422680 (-)

Homology

• Gene Tree
  Gm21018
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000117625 (Evidence)
• NCBI Gene
  100534295

Representative Sequences			Length	Strain/Species
genomic	100534295	NCBI Gene Model | MGI Sequence Detail	1188	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;