Gm20758 Gene Detail

Summary

• Symbol
  Gm20758
• Name
  predicted gene, 20758

• Feature Type
  lncRNA gene
• IDs
  MGI:5434114
  NCBI Gene: 629206
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:111690426-111710281 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  758 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5434114	lncRNA gene	Chr10:111690426-111712809 (-)
129S1/SvImJ	ENSMUSG00200011151	lncRNA gene	Chr10:108109142-108128994 (-)
A/J	ENSMUSG00195008710	lncRNA gene	Chr10:108524596-108544454 (-)
AKR/J	ENSMUSG00220025169	lncRNA gene	Chr10:108106015-108125876 (-)
BALB/cJ	ENSMUSG00180025559	lncRNA gene	Chr10:108544114-108563972 (-)
C3H/HeJ	ENSMUSG00175015632	lncRNA gene	Chr10:108472471-108492329 (-)
C57BL/6NJ	ENSMUSG00215011663	lncRNA gene	Chr10:108195440-108215295 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011515	lncRNA gene	Chr10:107569028-107589183 (-)
CBA/J	ENSMUSG00210011564	lncRNA gene	Chr10:108343806-108363665 (-)
DBA/2J	ENSMUSG00185024459	lncRNA gene	Chr10:108479328-108499190 (-)
FVB/NJ	ENSMUSG00205011408	lncRNA gene	Chr10:107972834-107992692 (-)
JF1/MsJ	ENSUMUG00000011321	lncRNA gene	Chr10:109802733-109822880 (-)
LP/J	ENSMUSG00230013798	lncRNA gene	Chr10:110418375-110438230 (-)
NOD/ShiLtJ	ENSMUSG00190021152	lncRNA gene	Chr10:108571525-108591383 (-)
NZO/HlLtJ	ENSMUSG00225018509	lncRNA gene	Chr10:114672711-114692566 (-)
PWK/PhJ	ENSLUMG00010014063	lncRNA gene	Chr10:108175942-108196037 (-)
SPRET/EiJ	ENSMSPG00010005916	lncRNA gene	Chr10:110002545-110022630 (-)
WSB/EiJ	ENSIUOG00005010381	lncRNA gene	Chr10:108244983-108264902 (-)

Homology

• Gene Tree
  Gm20758
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Gene trapped
  2
• Genomic Mutations
  1 involving Gm20758
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  1

• Ensembl
  ENSMUSG00000112533 (Evidence)
• NCBI Gene
  629206

Representative Sequences			Length	Strain/Species
genomic	629206	NCBI Gene Model | MGI Sequence Detail	19856	C57BL/6J
transcript	NR_046029	RefSeq | MGI Sequence Detail	2171	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 11

  Phenotypes 7
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9