Gm21917 Gene Detail

Summary

• Symbol
  Gm21917
• Name
  predicted gene, 21917

• Feature Type
  lncRNA gene
• IDs
  MGI:5434081
  NCBI Gene: 102638921
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr15:99829431-99850631 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  509 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5434081	lncRNA gene	Chr15:99829357-99850958 (+)
129S1/SvImJ	ENSMUSG00200052670	lncRNA gene	Chr15:97031479-97053805 (+)
A/J	ENSMUSG00195046824	lncRNA gene	Chr15:96898840-96920175 (+)
AKR/J	ENSMUSG00220050446	lncRNA gene	Chr15:96906114-96927463 (+)
BALB/cJ	ENSMUSG00180048261	lncRNA gene	Chr15:96808592-96829771 (+)
C3H/HeJ	ENSMUSG00175048481	lncRNA gene	Chr15:97078849-97100184 (+)
C57BL/6NJ	ENSMUSG00215051464	lncRNA gene	Chr15:96867973-96889308 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002940	antisense lncRNA gene	Chr15:93633657-93635450 (+)
CAST/EiJ	ENSTCUG00005047757	lncRNA gene	Chr15:96340329-96362140 (+)
CBA/J	ENSMUSG00210032011	lncRNA gene	Chr15:96865494-96886679 (+)
DBA/2J	ENSMUSG00185042681	lncRNA gene	Chr15:96912495-96933826 (+)
FVB/NJ	ENSMUSG00205047832	lncRNA gene	Chr15:96616981-96638316 (+)
JF1/MsJ	ENSUMUG00000057148	lncRNA gene	Chr15:96364737-96387212 (+)
LP/J	ENSMUSG00230041271	lncRNA gene	Chr15:100254848-100277171 (+)
NOD/ShiLtJ	ENSMUSG00190049676	lncRNA gene	Chr15:96882527-96903861 (+)
NZO/HlLtJ	ENSMUSG00225043390	lncRNA gene	Chr15:100504860-100526193 (+)
PWK/PhJ	ENSLUMG00010050588	lncRNA gene	Chr15:96587400-96608744 (+)
SPRET/EiJ	ENSMSPG00010050164	lncRNA gene	Chr15:98388526-98410773 (+)
WSB/EiJ	ENSIUOG00005042099	lncRNA gene	Chr15:96993134-97014463 (+)

Homology

• Gene Tree
  Gm21917
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  24 phenotype references
  

• All Mutations and Alleles
  25
• Chemically induced (other)
  1
• Gene trapped
  22
• Radiation induced
  2
• Genomic Mutations
  3 involving Gm21917
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  30
• RefSeq
  2

• Ensembl
  ENSMUSG00000096111 (Evidence)
• NCBI Gene
  102638921

Representative Sequences			Length	Strain/Species
genomic	102638921	NCBI Gene Model | MGI Sequence Detail	21201	C57BL/6J
transcript	XR_003951482	RefSeq | MGI Sequence Detail	1026	C57BL/6J

References

• Summaries
  All 28

  Diseases 1

  Phenotypes 24
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:387680 Ahn B, et al., Disorganization of Transcriptional Regulation and Alteration of Keratin Family Gene Expression in Hairy Ear Mice. Genes (Basel). 2026 Jan 31;17(2)

TSS for Gm21917:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr133075	Chr15:99829560-99829576 (+)	137 bp