Gm21909 Pseudogene Detail

Summary

• Symbol
  Gm21909
• Name
  predicted gene, 21909

• Feature Type
  pseudogene
• IDs
  MGI:5434073
  NCBI Gene: 101056161
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:21382741-21386544 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  290 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5434073	pseudogene	Chr1:21382740-21411612 (-)
129S1/SvImJ	ENSMUSG00200018891	pseudogene	Chr1:18783453-18787258 (-)
A/J	ENSMUSG00195028558	pseudogene	Chr1:18549882-18553914 (-)
AKR/J	ENSMUSG00220008452	pseudogene	Chr1:18593521-18597552 (-)
BALB/cJ	ENSMUSG00180025597	pseudogene	Chr1:18616072-18620103 (-)
C3H/HeJ	ENSMUSG00175000260	pseudogene	Chr1:18545360-18549393 (-)
C57BL/6NJ	ENSMUSG00215014151	pseudogene	Chr1:18633105-18636909 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005022264	pseudogene	Chr1:18856324-18860372 (-)
CBA/J	ENSMUSG00210002853	pseudogene	Chr1:18421715-18425750 (-)
DBA/2J	ENSMUSG00185003996	pseudogene	Chr1:19465944-19469978 (-)
FVB/NJ	ENSMUSG00205017942	pseudogene	Chr1:18546560-18550593 (-)
JF1/MsJ	ENSUMUG00000024878	pseudogene	Chr1:18702762-18706951 (-)
LP/J	ENSMUSG00230019909	pseudogene	Chr1:19474853-19478656 (-)
NOD/ShiLtJ	ENSMUSG00190032312	pseudogene	Chr1:18528540-18532572 (-)
NZO/HlLtJ	ENSMUSG00225001045	pseudogene	Chr1:22845397-22849428 (-)
PWK/PhJ	ENSLUMG00010022164	pseudogene	Chr1:18328102-18332279 (-)
SPRET/EiJ	ENSMSPG00010028381	pseudogene	Chr1:19261611-19266331 (-)
WSB/EiJ	ENSIUOG00005012267	pseudogene	Chr1:18513561-18517578 (-)

Homology

• Gene Tree
  Gm21909
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000093963 (Evidence)
• NCBI Gene
  101056161

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000093963	Ensembl Gene Model | MGI Sequence Detail	3804	C57BL/6J
transcript	ENSMUST00000178260	Ensembl | MGI Sequence Detail	439	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;