Gm21883 Pseudogene Detail

Summary

• Symbol
  Gm21883
• Name
  predicted gene, 21883

• Feature Type
  pseudogene
• IDs
  MGI:5434047
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:31231289-31231621 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  3 from dbSNP Build 142
• Strain Annotations
  30

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5434047	pseudogene	ChrX:31231289-31231621 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	ENSMUSG00185030693	pseudogene	ChrX:3906407-3907860 (+)
DBA/2J	ENSMUSG00185030255	pseudogene	ChrX:1421813-1423267 (-)
DBA/2J	ENSMUSG00185029520	pseudogene	ChrX:2917498-2918952 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000019281	pseudogene	ChrX:18926333-18927787 (-)
JF1/MsJ	ENSUMUG00000017381	pseudogene	ChrX:6988165-6989619 (+)
LP/J	ENSMUSG00230007900	pseudogene	ChrX:6518190-6519644 (-)
LP/J	ENSMUSG00230010303	pseudogene	Chr13:6431276-6432717 (-)
LP/J	ENSMUSG00230007432	pseudogene	ChrX:2971673-2973127 (-)
LP/J	ENSMUSG00230009927	pseudogene	Chr13:4569166-4570616 (-)
LP/J	ENSMUSG00230010299	pseudogene	Chr13:6206329-6207783 (-)
LP/J	ENSMUSG00230010185	pseudogene	Chr13:3952835-3954285 (+)
LP/J	ENSMUSG00230007455	pseudogene	ChrX:3734943-3736397 (+)
LP/J	ENSMUSG00230008006	pseudogene	ChrX:9135268-9136722 (+)
LP/J	ENSMUSG00230007364	pseudogene	ChrX:8746268-8747722 (+)
LP/J	ENSMUSG00230007604	pseudogene	ChrX:7765392-7766845 (-)
LP/J	ENSMUSG00230007885	pseudogene	ChrX:6271752-6273206 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225038337	pseudogene	ChrX:9916224-9917665 (+)
NZO/HlLtJ	ENSMUSG00225038030	pseudogene	ChrX:5174411-5175865 (-)
NZO/HlLtJ	ENSMUSG00225038127	pseudogene	ChrX:4117115-4118569 (+)
NZO/HlLtJ	ENSMUSG00225038094	pseudogene	ChrX:3360805-3362259 (-)
NZO/HlLtJ	ENSMUSG00225046559	pseudogene	ChrX:10141195-10142649 (+)
NZO/HlLtJ	ENSMUSG00225046353	pseudogene	ChrX:11768538-11769988 (+)
NZO/HlLtJ	ENSMUSG00225038543	pseudogene	ChrX:7375683-7377137 (+)
NZO/HlLtJ	ENSMUSG00225046377	pseudogene	ChrX:12384910-12386360 (-)
NZO/HlLtJ	ENSMUSG00225038554	pseudogene	ChrX:7622104-7623558 (+)
NZO/HlLtJ	ENSMUSG00225038169	pseudogene	ChrX:4785486-4786940 (-)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010026032	pseudogene	ChrX:3794891-3796363 (-)
WSB/EiJ	ENSIUOG00005005274	pseudogene	ChrX:104346058-104347512 (+)
WSB/EiJ	ENSIUOG00005005298	pseudogene	ChrX:104347071-104347403 (+)

Homology

• Gene Tree
  Gm21883
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  32

• Ensembl
  ENSMUSG00000118452 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118452	Ensembl Gene Model | MGI Sequence Detail	333	C57BL/6J
transcript	ENSMUST00000238617	Ensembl | MGI Sequence Detail	333	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;