Gm21781 Gene Detail

Summary

• Symbol
  Gm21781
• Name
  predicted gene, 21781

• Feature Type
  lncRNA gene
• IDs
  MGI:5433945
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:4341587-4346424 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  188 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5433945	lncRNA gene	Chr10:4341587-4346424 (+)
129S1/SvImJ	ENSMUSG00200010483	lncRNA gene	Chr10:1307189-1312024 (+)
A/J	ENSMUSG00195010008	lncRNA gene	Chr10:1282236-1287072 (+)
AKR/J	ENSMUSG00220007595	lncRNA gene	Chr10:1320420-1325254 (+)
BALB/cJ	ENSMUSG00180024390	lncRNA gene	Chr10:1376458-1381294 (+)
C3H/HeJ	ENSMUSG00175012980	lncRNA gene	Chr10:1340131-1344968 (+)
C57BL/6NJ	ENSMUSG00215005196	lncRNA gene	Chr10:1277254-1282092 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004617	lincRNA gene	Chr10:1139167-1143745 (+)
CAST/EiJ	ENSTCUG00005017931	lncRNA gene	Chr10:1365524-1370339 (+)
CBA/J	ENSMUSG00210012636	lncRNA gene	Chr10:1288436-1293273 (+)
DBA/2J	ENSMUSG00185010834	lncRNA gene	Chr10:1346558-1351397 (+)
FVB/NJ	ENSMUSG00205008484	lncRNA gene	Chr10:1327738-1332575 (+)
JF1/MsJ	ENSUMUG00000038103	lncRNA gene	Chr10:1471021-1475846 (+)
LP/J	ENSMUSG00230017056	lncRNA gene	Chr10:2975826-2980661 (+)
NOD/ShiLtJ	ENSMUSG00190025650	lncRNA gene	Chr10:1282307-1287144 (+)
NZO/HlLtJ	ENSMUSG00225013656	lncRNA gene	Chr10:7460602-7465442 (+)
PWK/PhJ	ENSLUMG00010020694	lncRNA gene	Chr10:1318560-1323388 (+)
SPRET/EiJ	ENSMSPG00010006932	lncRNA gene	Chr10:1508485-1513334 (+)
WSB/EiJ	ENSIUOG00005013989	lncRNA gene	Chr10:1324912-1329754 (+)

Homology

• Gene Tree
  Gm21781
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000095123 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000095123	Ensembl Gene Model | MGI Sequence Detail	4838	C57BL/6J
transcript	ENSMUST00000178920	Ensembl | MGI Sequence Detail	4838	Not Applicable

References

• Summaries
  All 4

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14