Gm21726 Pseudogene Detail

Summary

• Symbol
  Gm21726
• Name
  predicted gene, 21726

• Feature Type
  pseudogene
• IDs
  MGI:5433890
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:90731448-90731839 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  105 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5433890	pseudogene	Chr13:90731448-90731839 (+)
129S1/SvImJ	ENSMUSG00200009034	pseudogene	Chr13:85223961-85224352 (+)
A/J	ENSMUSG00195024229	pseudogene	Chr13:85738279-85738670 (+)
AKR/J	ENSMUSG00220013947	pseudogene	Chr13:84245352-84245743 (+)
BALB/cJ	ENSMUSG00180016638	pseudogene	Chr13:86246767-86247158 (+)
C3H/HeJ	ENSMUSG00175023503	pseudogene	Chr13:86455702-86456093 (+)
C57BL/6NJ	ENSMUSG00215002979	pseudogene	Chr13:86321867-86322258 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0018758	protein coding gene	Chr13:84439693-84440058 (+)
CAST/EiJ	ENSTCUG00005009800	pseudogene	Chr13:85548071-85548462 (+)
CBA/J	ENSMUSG00210024579	pseudogene	Chr13:85735591-85735982 (+)
DBA/2J	ENSMUSG00185010078	pseudogene	Chr13:89422483-89422874 (+)
FVB/NJ	ENSMUSG00205009003	pseudogene	Chr13:85195197-85195588 (+)
JF1/MsJ	ENSUMUG00000023054	pseudogene	Chr13:89128941-89129332 (+)
LP/J	ENSMUSG00230004777	pseudogene	Chr13:99438609-99439000 (+)
NOD/ShiLtJ	ENSMUSG00190018859	pseudogene	Chr13:86115923-86116314 (+)
NZO/HlLtJ	ENSMUSG00225034535	pseudogene	Chr13:91969994-91970385 (+)
PWK/PhJ	ENSLUMG00010012062	pseudogene	Chr13:85244894-85245285 (+)
SPRET/EiJ	ENSMSPG00010006834	pseudogene	Chr13:86448676-86449067 (+)
WSB/EiJ	ENSIUOG00005031150	pseudogene	Chr13:85124739-85125130 (+)

Homology

• Gene Tree
  Gm21726
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm21726
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000094277 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000094277	Ensembl Gene Model | MGI Sequence Detail	392	C57BL/6J
transcript	ENSMUST00000179654	Ensembl | MGI Sequence Detail	392	Not Applicable

References

• Summaries
  All 5

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69