Gm20717 Gene Detail

Summary

• Symbol
  Gm20717
• Name
  predicted gene 20717

• Feature Type
  lncRNA gene
• IDs
  MGI:5313164
  NCBI Gene: 102632272
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr15:63970166-63973246 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 28.57 cM

Strain
Comparison

• SNPs within 2kb
  181 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5313164	lncRNA gene	Chr15:63969208-63973519 (+)
129S1/SvImJ	ENSMUSG00200031966	lncRNA gene	Chr15:61003044-61006126 (+)
A/J	ENSMUSG00195028719	lncRNA gene	Chr15:61093229-61096325 (+)
AKR/J	ENSMUSG00220021772	lncRNA gene	Chr15:60943001-60946089 (+)
BALB/cJ	ENSMUSG00180023670	lncRNA gene	Chr15:60935635-60938727 (+)
C3H/HeJ	ENSMUSG00175005261	lncRNA gene	Chr15:61260697-61263793 (+)
C57BL/6NJ	ENSMUSG00215006091	lncRNA gene	Chr15:60953921-60957001 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013430	unclassified non-coding RNA gene	Chr15:58013272-58016524 (+)
CAST/EiJ	ENSTCUG00005006958	lncRNA gene	Chr15:60749069-60752175 (+)
CBA/J	ENSMUSG00210025377	lncRNA gene	Chr15:61058700-61061796 (+)
DBA/2J	ENSMUSG00185025309	lncRNA gene	Chr15:60994118-60997198 (+)
FVB/NJ	ENSMUSG00205007534	lncRNA gene	Chr15:60752892-60755980 (+)
JF1/MsJ	ENSUMUG00000030975	lncRNA gene	Chr15:60736721-60739832 (+)
LP/J	ENSMUSG00230025400	lncRNA gene	Chr15:64329719-64332799 (+)
NOD/ShiLtJ	ENSMUSG00190004600	lncRNA gene	Chr15:61042456-61045536 (+)
NZO/HlLtJ	ENSMUSG00225027222	lncRNA gene	Chr15:64612306-64615386 (+)
PWK/PhJ	ENSLUMG00010031256	lncRNA gene	Chr15:61046849-61049947 (+)
SPRET/EiJ	ENSMSPG00010004455	lncRNA gene	Chr15:62346520-62349620 (+)
WSB/EiJ	ENSIUOG00005006675	lncRNA gene	Chr15:61052715-61055806 (+)

Homology

• Gene Tree
  Gm20717
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  22 phenotype references
  

• All Mutations and Alleles
  6
• Chemically induced (other)
  3
• Radiation induced
  1
• Transposon induced
  2
• Genomic Mutations
  6 involving Gm20717
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  4

• Ensembl
  ENSMUSG00000093695 (Evidence)
• NCBI Gene
  102632272

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000093695	Ensembl Gene Model | MGI Sequence Detail	3081	C57BL/6J
transcript	ENSMUST00000176762	Ensembl | MGI Sequence Detail	657	Not Applicable

References

• Summaries
  All 27

  Phenotypes 22
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:387680 Ahn B, et al., Disorganization of Transcriptional Regulation and Alteration of Keratin Family Gene Expression in Hairy Ear Mice. Genes (Basel). 2026 Jan 31;17(2)

TSS for Gm20717:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr131454	Chr15:63970165-63970200 (+)	17 bp