Gm20631 Gene Detail

Summary

• Symbol
  Gm20631
• Name
  predicted gene 20631

• Feature Type
  lncRNA gene
• IDs
  MGI:5313078
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr1:150501017-150659250 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 63.84 cM

Strain
Comparison

• SNPs within 2kb
  4990 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5313078	lncRNA gene	Chr1:150501017-150659250 (+)
129S1/SvImJ	ENSMUSG00200002878	lncRNA gene	Chr1:147963390-148125372 (+)
A/J	ENSMUSG00195014510	lncRNA gene	Chr1:147313577-147471897 (+)
AKR/J	ENSMUSG00220006689	lncRNA gene	Chr1:147081666-147239249 (+)
BALB/cJ	ENSMUSG00180033807	lncRNA gene	Chr1:147518510-147676751 (+)
C3H/HeJ	ENSMUSG00175003070	lncRNA gene	Chr1:147565356-147723683 (+)
C57BL/6NJ	ENSMUSG00215003990	lncRNA gene	Chr1:147460647-147618884 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002413	antisense lncRNA gene	Chr1:141384007-141428236 (+)
CAST/EiJ	ENSTCUG00005006251	lncRNA gene	Chr1:146084910-146243114 (+)
CBA/J	ENSMUSG00210034670	lncRNA gene	Chr1:147466240-147624530 (+)
DBA/2J	ENSMUSG00185007230	lncRNA gene	Chr1:151726603-151892069 (+)
FVB/NJ	ENSMUSG00205034632	lncRNA gene	Chr1:146603962-146762724 (+)
JF1/MsJ	ENSUMUG00000012681	lncRNA gene	Chr1:150883211-151040764 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190012909	lncRNA gene	Chr1:147304119-147462332 (+)
NZO/HlLtJ	ENSMUSG00225006433	lncRNA gene	Chr1:155004891-155166862 (+)
PWK/PhJ	ENSLUMG00010030965	lncRNA gene	Chr1:146260393-146425701 (+)
SPRET/EiJ	ENSMSPG00010005806	lncRNA gene	Chr1:149586928-149767103 (+)
WSB/EiJ	ENSIUOG00005025133	lncRNA gene	Chr1:146900007-147064819 (+)

Homology

• Gene Tree
  Gm20631
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm20631
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000093650 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000093650	Ensembl Gene Model | MGI Sequence Detail	158234	C57BL/6J
transcript	ENSMUST00000177239	Ensembl | MGI Sequence Detail	5697	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm20631:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr9368	Chr1:150501041-150501052 (+)	30 bp
Tssr244	Chr1:150624367-150624369 (+)	123,351 bp