Gm20616 Gene Detail

Summary

• Symbol
  Gm20616
• Name
  predicted gene 20616

• Feature Type
  lncRNA gene
• IDs
  MGI:5313063
  NCBI Gene: 102638259
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr19:26598149-26600805 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 21.18 cM

Strain
Comparison

• SNPs within 2kb
  143 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5313063	lncRNA gene	Chr19:26598140-26600836 (-)
129S1/SvImJ	ENSMUSG00200020810	lncRNA gene	Chr19:23315153-23317750 (-)
A/J	ENSMUSG00195037214	lncRNA gene	Chr19:23477217-23479814 (-)
AKR/J	ENSMUSG00220020068	lncRNA gene	Chr19:23517382-23519978 (-)
BALB/cJ	ENSMUSG00180014021	lncRNA gene	Chr19:23809588-23812185 (-)
C3H/HeJ	ENSMUSG00175025472	lncRNA gene	Chr19:23186436-23189033 (-)
C57BL/6NJ	ENSMUSG00215031449	lncRNA gene	Chr19:23226758-23229355 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013518	unclassified non-coding RNA gene	Chr19:23702505-23705101 (-)
CAST/EiJ	ENSTCUG00005018708	lncRNA gene	Chr19:23046512-23049126 (-)
CBA/J	ENSMUSG00210015142	lncRNA gene	Chr19:23417391-23419988 (-)
DBA/2J	ENSMUSG00185026591	lncRNA gene	Chr19:23804093-23806690 (-)
FVB/NJ	ENSMUSG00205013370	lncRNA gene	Chr19:23176362-23178960 (-)
JF1/MsJ	ENSUMUG00000038953	lncRNA gene	Chr19:24013216-24015824 (-)
LP/J	ENSMUSG00230029463	lncRNA gene	Chr19:24624601-24627198 (-)
NOD/ShiLtJ	ENSMUSG00190023212	lncRNA gene	Chr19:23180496-23183093 (-)
NZO/HlLtJ	ENSMUSG00225034494	lncRNA gene	Chr19:28375450-28378047 (-)
PWK/PhJ	ENSLUMG00010036246	lncRNA gene	Chr19:23365231-23367839 (-)
SPRET/EiJ	ENSMSPG00010037316	lncRNA gene	Chr19:23352613-23355212 (-)
WSB/EiJ	ENSIUOG00005028682	lncRNA gene	Chr19:22904055-22906653 (-)

Homology

• Gene Tree
  Gm20616
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  31
• RefSeq
  1

• Ensembl
  ENSMUSG00000093628 (Evidence)
• NCBI Gene
  102638259

Representative Sequences			Length	Strain/Species
genomic	102638259	NCBI Gene Model | MGI Sequence Detail	2657	C57BL/6J
transcript	AK076909	GenBank | ENA | DDBJ | MGI Sequence Detail	903	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm20616:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr158702	Chr19:26600794-26600831 (-)	-8 bp