Cyp3a61-ps1 Pseudogene Detail

Summary

• Symbol
  Cyp3a61-ps1
• Name
  cytochrome P450, family 3, subfamily a, member 61, pseudogene 1
• Synonyms
  Gm20577

• Feature Type
  pseudogene
• IDs
  MGI:5295684
  NCBI Gene: 100125874
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:138382074-138389856 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 77.05 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  288 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5295684	pseudogene	Chr5:138382052-138389856 (-)
129S1/SvImJ	ENSMUSG00200047498	pseudogene	Chr5:132254252-132262116 (-)
A/J	ENSMUSG00195051098	pseudogene	Chr5:131787565-131795430 (-)
AKR/J	ENSMUSG00220050302	pseudogene	Chr5:131132877-131140665 (-)
BALB/cJ	ENSMUSG00180045807	pseudogene	Chr5:131884144-131892005 (-)
C3H/HeJ	ENSMUSG00175047833	pseudogene	Chr5:133811613-133819478 (-)
C57BL/6NJ	ENSMUSG00215049511	pseudogene	Chr5:131825766-131833559 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035641	pseudogene	Chr5:131195316-131208633 (-)
CBA/J	ENSMUSG00210024198	pseudogene	Chr5:132629132-132636997 (-)
DBA/2J	ENSMUSG00185055539	pseudogene	Chr5:135644485-135652350 (-)
FVB/NJ	ENSMUSG00205049763	pseudogene	Chr5:131446041-131453906 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230049847	pseudogene	Chr5:139757930-139765799 (-)
NOD/ShiLtJ	ENSMUSG00190047030	pseudogene	Chr5:131583816-131591681 (-)
NZO/HlLtJ	ENSMUSG00225024170	pseudogene	Chr5:147311552-147319416 (-)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010039764	pseudogene	Chr5:133839609-133853742 (-)
WSB/EiJ	ENSIUOG00005038471	pseudogene	Chr5:134113259-134121048 (-)

Homology

• Gene Tree
  Cyp3a61-ps1
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000112214 (Evidence)
• NCBI Gene
  100125874

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112214	Ensembl Gene Model | MGI Sequence Detail	7783	C57BL/6J
transcript	ENSMUST00000218470	Ensembl | MGI Sequence Detail	592	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;