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Gm20546 Gene Detail
Summary
  • Symbol
    Gm20546
  • Name
    predicted gene 20546
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5142011
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr17:36559713-36564571 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 19.01 cM
Strain
Comparison
more
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5142011
 lncRNA gene Chr17:36559713-36564571 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005732
 lincRNA gene Chr17:36601932-36607944 (+)
A/J MGP_AJ_G0005720
 lincRNA gene Chr17:35397246-35401867 (+)
AKR/J MGP_AKRJ_G0005700
 lincRNA gene Chr17:35811346-35817939 (+)
BALB/cJ MGP_BALBcJ_G0005700
 lincRNA gene Chr17:35592409-35596901 (+)
C3H/HeJ MGP_C3HHeJ_G0005648
 lincRNA gene Chr17:36316826-36321956 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005858
 lincRNA gene Chr17:38068727-38074330 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0005590
 lincRNA gene Chr17:36350797-36355863 (+)
CBA/J MGP_CBAJ_G0005636
 lincRNA gene Chr17:39632687-39637527 (+)
DBA/2J MGP_DBA2J_G0005654
 lincRNA gene Chr17:34755157-34759505 (+)
FVB/NJ MGP_FVBNJ_G0005680
 lincRNA gene Chr17:34456931-34461253 (+)
LP/J MGP_LPJ_G0005735
 lincRNA gene Chr17:37012866-37017410 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005665
 lincRNA gene Chr17:38438675-38444495 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005859
 lincRNA gene Chr17:36119649-36127692 (+)
PWK/PhJ MGP_PWKPhJ_G0005534
 lincRNA gene Chr17:33561147-33565773 (+)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0005642
 lincRNA gene Chr17:36357626-36363038 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    18
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000092392 Ensembl Gene Model | MGI Sequence Detail 4859 C57BL/6J ±  kb
transcript ENSMUST00000173141 Ensembl | MGI Sequence Detail 1889 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 3
    Phenotypes 1
  • Earliest
    J:190754 Ermakova O, et al., Construction and phenotypic analysis of mice carrying a duplication of the major histocompatibility class I (MHC-I) locus. Mamm Genome. 2012 Aug;23(7-8):443-53
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory