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Gm20389 Gene Detail
Summary
  • Symbol
    Gm20389
  • Name
    predicted gene 20389
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5141854
    NCBI Gene: 102635958
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:154414295-154416980 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 79.29 cM
Strain
Comparison
more
  • SNPs within 2kb
    73 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5141854
 lncRNA gene Chr3:154414293-154416984 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003864
 antisense lncRNA gene Chr3:158726751-158729436 (-)
A/J MGP_AJ_G0003844
 antisense lncRNA gene Chr3:152933407-152936099 (-)
AKR/J MGP_AKRJ_G0003821
 antisense lncRNA gene Chr3:157026045-157028730 (-)
BALB/cJ MGP_BALBcJ_G0003831
 antisense lncRNA gene Chr3:152742511-152745203 (-)
C3H/HeJ MGP_C3HHeJ_G0003776
 antisense lncRNA gene Chr3:157391664-157394356 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003975
 antisense lncRNA gene Chr3:163899591-163902276 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003475
 antisense lncRNA gene Chr3:147686170-147688858 (-)
CAST/EiJ MGP_CASTEiJ_G0003742
 antisense lncRNA gene Chr3:157520167-157522859 (-)
CBA/J MGP_CBAJ_G0003770
 antisense lncRNA gene Chr3:169798124-169800809 (-)
DBA/2J MGP_DBA2J_G0003785
 antisense lncRNA gene Chr3:152005353-152008045 (-)
FVB/NJ MGP_FVBNJ_G0003806
 antisense lncRNA gene Chr3:149382410-149385099 (-)
LP/J MGP_LPJ_G0003866
 antisense lncRNA gene Chr3:160052022-160054707 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003793
 antisense lncRNA gene Chr3:178236928-178239620 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003974
 antisense lncRNA gene Chr3:156664633-156667325 (-)
PWK/PhJ MGP_PWKPhJ_G0003698
 antisense lncRNA gene Chr3:151937785-151940476 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003643
 antisense lncRNA gene Chr3:154829962-154832662 (-)
WSB/EiJ MGP_WSBEiJ_G0003778
 antisense lncRNA gene Chr3:157655104-157657796 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000092522 Ensembl Gene Model | MGI Sequence Detail 2686 C57BL/6J ±  kb
transcript ENSMUST00000174217 Ensembl | MGI Sequence Detail 1006 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 4
  • Earliest
    J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory