Gm20383 Gene Detail

Summary

• Symbol
  Gm20383
• Name
  predicted gene, 20383

• Feature Type
  lncRNA gene
• IDs
  MGI:5012568
  NCBI Gene: 100504740
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:81961302-81969407 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 35.81 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  383 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012568	lncRNA gene	Chr6:81943554-81969409 (+)
129S1/SvImJ	ENSMUSG00200012606	lncRNA gene	Chr6:78937612-78945631 (+)
A/J	ENSMUSG00195012545	lncRNA gene	Chr6:78625367-78633391 (+)
AKR/J	ENSMUSG00220002000	lncRNA gene	Chr6:77561041-77569059 (+)
BALB/cJ	ENSMUSG00180010321	lncRNA gene	Chr6:79001477-79009500 (+)
C3H/HeJ	ENSMUSG00175038944	lncRNA gene	Chr6:98418819-98426913 (-)
C57BL/6NJ	ENSMUSG00215017547	lncRNA gene	Chr6:78972141-78980233 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006373	lincRNA gene	Chr6:78192000-78200095 (+)
CAST/EiJ	ENSTCUG00005008472	lncRNA gene	Chr6:79019319-79027382 (+)
CBA/J	ENSMUSG00210011696	lncRNA gene	Chr6:78793117-78801211 (+)
DBA/2J	ENSMUSG00185000969	lncRNA gene	Chr6:79346063-79354157 (+)
FVB/NJ	ENSMUSG00205026466	lncRNA gene	Chr6:78047872-78055900 (+)
JF1/MsJ	ENSUMUG00000022921	lncRNA gene	Chr6:78406201-78414310 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190002175	lncRNA gene	Chr6:78446487-78454513 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010006546	lncRNA gene	Chr6:77783455-77790584 (+)
SPRET/EiJ	ENSMSPG00010000407	lncRNA gene	Chr6:79922493-79930569 (+)
WSB/EiJ	ENSIUOG00005019739	lncRNA gene	Chr6:79366957-79374961 (+)

Homology

• Gene Tree
  Gm20383
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  2
• Endonuclease-mediated
  1
• Spontaneous
  1
• Genomic Mutations
  2 involving Gm20383
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  30
• RefSeq
  2

• Ensembl
  ENSMUSG00000107412 (Evidence)
• NCBI Gene
  100504740

Representative Sequences			Length	Strain/Species
genomic	100504740	NCBI Gene Model | MGI Sequence Detail	8106	C57BL/6J
transcript	NR_157233	RefSeq | MGI Sequence Detail	1321	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 12

  Phenotypes 7
• Earliest
  J:87486 Akeson EC, Chromosomal inversion discovered in C3H/HeJ mice. JAX Notes. 2003;491:15
• Latest
  J:386463 Rias E, et al., Protocol for isolation of total RNA from mouse whole cochlea using organic solvents. STAR Protoc. 2026 Mar 20;7(1):104376