Gm20369 Pseudogene Detail

Summary

• Symbol
  Gm20369
• Name
  predicted gene, 20369

• Feature Type
  pseudogene
• IDs
  MGI:5012554
  NCBI Gene: 102636551
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr15:84066910-84067216 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 39.78 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  104 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012554	pseudogene	Chr15:84066792-84067434 (-)
129S1/SvImJ	ENSMUSG00200054150	pseudogene	Chr15:81193326-81193632 (-)
A/J	ENSMUSG00195052428	pseudogene	Chr15:81119072-81119378 (-)
AKR/J	ENSMUSG00220032238	pseudogene	Chr15:81165895-81166201 (-)
BALB/cJ	ENSMUSG00180054061	pseudogene	Chr15:80995886-80996192 (-)
C3H/HeJ	ENSMUSG00175029291	pseudogene	Chr15:81306799-81307105 (-)
C57BL/6NJ	ENSMUSG00215032895	pseudogene	Chr15:81084797-81085103 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005047966	pseudogene	Chr15:80585434-80585737 (-)
CBA/J	ENSMUSG00210013149	pseudogene	Chr15:81081773-81082079 (-)
DBA/2J	ENSMUSG00185051727	pseudogene	Chr15:81119359-81119665 (-)
FVB/NJ	ENSMUSG00205052486	pseudogene	Chr15:80863253-80863559 (-)
JF1/MsJ	ENSUMUG00000056606	pseudogene	Chr15:80644733-80645039 (-)
LP/J	ENSMUSG00230046009	pseudogene	Chr15:84433589-84433895 (-)
NOD/ShiLtJ	ENSMUSG00190053757	pseudogene	Chr15:81098903-81099209 (-)
NZO/HlLtJ	ENSMUSG00225050326	pseudogene	Chr15:84765590-84765896 (-)
PWK/PhJ	ENSLUMG00010052493	pseudogene	Chr15:80846905-80847208 (-)
SPRET/EiJ	ENSMSPG00010014945	pseudogene	Chr15:82498178-82498484 (-)
WSB/EiJ	ENSIUOG00005050560	pseudogene	Chr15:81181693-81181999 (-)

Homology

• Gene Tree
  Gm20369
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  19 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Gene trapped
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm20369
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000116041 (Evidence)
• NCBI Gene
  102636551

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116041	Ensembl Gene Model | MGI Sequence Detail	307	C57BL/6J
transcript	ENSMUST00000229976	Ensembl | MGI Sequence Detail	307	Not Applicable

References

• Summaries
  All 22

  Phenotypes 19
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:387680 Ahn B, et al., Disorganization of Transcriptional Regulation and Alteration of Keratin Family Gene Expression in Hairy Ear Mice. Genes (Basel). 2026 Jan 31;17(2)

TSS for Gm20369:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr135708	Chr15:84067259-84067275 (-)	-51 bp