Gm20368 Pseudogene Detail

Summary

• Symbol
  Gm20368
• Name
  predicted gene, 20368

• Feature Type
  pseudogene
• IDs
  MGI:5012553
  NCBI Gene: 102640838
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:112171135-112171587 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 61.14 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  201 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012553	pseudogene	Chr12:112169710-112171613 (-)
129S1/SvImJ	ENSMUSG00200027443	pseudogene	Chr12:103949360-103949812 (-)
A/J	ENSMUSG00195045847	pseudogene	Chr12:106470920-106471360 (-)
AKR/J	ENSMUSG00220040783	pseudogene	Chr12:104368483-104368923 (-)
BALB/cJ	ENSMUSG00180052051	pseudogene	Chr12:105712510-105712962 (-)
C3H/HeJ	ENSMUSG00175046273	pseudogene	Chr12:108284846-108285286 (-)
C57BL/6NJ	ENSMUSG00215051285	pseudogene	Chr12:104985450-104985902 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005042371	pseudogene	Chr12:104462939-104463374 (-)
CBA/J	ENSMUSG00210035679	pseudogene	Chr12:105346253-105346693 (-)
DBA/2J	ENSMUSG00185035568	pseudogene	Chr12:107169763-107170203 (-)
FVB/NJ	ENSMUSG00205042597	pseudogene	Chr12:104392057-104392497 (-)
JF1/MsJ	ENSUMUG00000035196	pseudogene	Chr12:111946121-111946573 (-)
LP/J	ENSMUSG00230045121	pseudogene	Chr12:114213895-114214347 (-)
NOD/ShiLtJ	ENSMUSG00190048769	pseudogene	Chr12:80834676-80835128 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010051724	pseudogene	Chr12:105393826-105394266 (-)
SPRET/EiJ	ENSMSPG00010020890	pseudogene	Chr12:107674402-107674840 (-)
WSB/EiJ	ENSIUOG00005039997	pseudogene	Chr12:104375268-104375708 (-)

Homology

• Gene Tree
  Gm20368
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000113282 (Evidence)
• NCBI Gene
  102640838

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113282	Ensembl Gene Model | MGI Sequence Detail	453	C57BL/6J
transcript	ENSMUST00000220716	Ensembl | MGI Sequence Detail	301	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;