Gm20305 Pseudogene Detail

Summary

• Symbol
  Gm20305
• Name
  predicted gene, 20305

• Feature Type
  pseudogene
• IDs
  MGI:5012490
  NCBI Gene: 102238517
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:180681847-180682023 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 84.46 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  89 from dbSNP Build 142
• Strain Annotations
  37

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012490	pseudogene	Chr1:180681624-180682079 (-)
129S1/SvImJ	ENSMUSG00200031719	pseudogene	Chr5:117579751-117579927 (+)
129S1/SvImJ	ENSMUSG00200024067	pseudogene	Chr1:178433988-178434164 (-)
A/J	ENSMUSG00195044441	pseudogene	Chr1:178050675-178050851 (-)
A/J	ENSMUSG00195013131	pseudogene	Chr5:117101230-117101406 (+)
AKR/J	ENSMUSG00220021198	pseudogene	Chr1:177286798-177286974 (-)
AKR/J	ENSMUSG00220048508	pseudogene	Chr5:116618100-116618276 (+)
BALB/cJ	ENSMUSG00180042572	pseudogene	Chr5:117216176-117216352 (+)
BALB/cJ	ENSMUSG00180037537	pseudogene	Chr1:178085197-178085373 (-)
BALB/cJ	ENSMUSG00180046939	pseudogene	Chr17:30192979-30193155 (-)
C3H/HeJ	ENSMUSG00175039463	pseudogene	Chr1:178261003-178261179 (-)
C3H/HeJ	ENSMUSG00175035571	pseudogene	Chr5:119224384-119224560 (+)
C57BL/6NJ	ENSMUSG00215029175	pseudogene	Chr1:177485871-177486047 (-)
C57BL/6NJ	ENSMUSG00215044711	pseudogene	Chr5:117271862-117272038 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005000726	pseudogene	Chr5:59329488-59329664 (-)
CAST/EiJ	ENSTCUG00005020055	pseudogene	Chr8:18005500-18005676 (+)
CAST/EiJ	ENSTCUG00005002070	pseudogene	Chr3:75444917-75445093 (-)
CAST/EiJ	ENSTCUG00005043179	pseudogene	Chr1:176012881-176013057 (-)
CAST/EiJ	ENSTCUG00005042887	pseudogene	Chr5:116511436-116511612 (+)
CBA/J	ENSMUSG00210011012	pseudogene	Chr5:117975139-117975315 (+)
CBA/J	ENSMUSG00210019471	pseudogene	Chr1:177922533-177922709 (-)
DBA/2J	ENSMUSG00185055683	pseudogene	Chr5:121026399-121026575 (+)
DBA/2J	ENSMUSG00185055922	pseudogene	Chr17:32212286-32212462 (-)
DBA/2J	ENSMUSG00185037256	pseudogene	Chr1:182541981-182542157 (-)
FVB/NJ	ENSMUSG00205048122	pseudogene	Chr5:116901717-116901893 (+)
FVB/NJ	ENSMUSG00205037758	pseudogene	Chr1:176980665-176980841 (-)
JF1/MsJ	ENSUMUG00000021832	pseudogene	Chr1:181519398-181519574 (-)
LP/J	ENSMUSG00230012593	pseudogene	Chr8:27261518-27261694 (+)
LP/J	ENSMUSG00230048614	pseudogene	Chr5:125101693-125101869 (+)
LP/J	ENSMUSG00230033272	pseudogene	Chr1:182099816-182099992 (-)
NOD/ShiLtJ	ENSMUSG00190054492	pseudogene	Chr17:29691876-29692052 (-)
NOD/ShiLtJ	ENSMUSG00190039487	pseudogene	Chr1:177946860-177947036 (-)
NOD/ShiLtJ	ENSMUSG00190048386	pseudogene	Chr5:116900782-116900958 (+)
NZO/HlLtJ	ENSMUSG00225014797	pseudogene	Chr5:132804705-132804881 (+)
NZO/HlLtJ	ENSMUSG00225011270	pseudogene	Chr1:185853972-185854148 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005020929	pseudogene	Chr5:119607166-119607342 (+)
WSB/EiJ	ENSIUOG00005011741	pseudogene	Chr1:177159698-177159874 (-)

Homology

• Gene Tree
  Gm20305
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm20305
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  41
• RefSeq
  1

• Ensembl
  ENSMUSG00000103979 (Evidence)
• NCBI Gene
  102238517

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103979	Ensembl Gene Model | MGI Sequence Detail	177	C57BL/6J
transcript	ENSMUST00000193226	Ensembl | MGI Sequence Detail	177	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;