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Gm20162 Pseudogene Detail
Summary
  • Symbol
    Gm20162
  • Name
    predicted gene, 20162
Location &
Maps
more
  • Sequence Map
    Chr18:37567296-37568166 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 19.49 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    48 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5012347
 pseudogene Chr18:37566305-37568476 (+)
129S1/SvImJ MGP_129S1SvImJ_G0011436
 pseudogene Chr18:35827039-35827909 (+)
A/J MGP_AJ_G0011429
 pseudogene Chr18:34607276-34608146 (+)
AKR/J MGP_AKRJ_G0011393
 pseudogene Chr18:35558485-35559355 (+)
BALB/cJ MGP_BALBcJ_G0011408
 pseudogene Chr18:34653857-34654727 (+)
C3H/HeJ MGP_C3HHeJ_G0011295
 pseudogene Chr18:35630951-35631821 (+)
C57BL/6NJ MGP_C57BL6NJ_G0011701
 pseudogene Chr18:37127087-37127957 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0010258
 pseudogene Chr18:34659168-34659993 (+)
CAST/EiJ MGP_CASTEiJ_G0011103
 pseudogene Chr18:35592770-35593606 (+)
CBA/J MGP_CBAJ_G0011271
 pseudogene Chr18:38216312-38217182 (+)
DBA/2J MGP_DBA2J_G0011324
 pseudogene Chr18:34203993-34204863 (+)
FVB/NJ MGP_FVBNJ_G0011331
 pseudogene Chr18:33928158-33929028 (+)
LP/J MGP_LPJ_G0011396
 pseudogene Chr18:35909610-35910480 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0011323
 pseudogene Chr18:39494933-39495803 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0011687
 pseudogene Chr18:35426048-35426918 (+)
PWK/PhJ MGP_PWKPhJ_G0010965
 pseudogene Chr18:34440525-34441395 (+)
SPRET/EiJ MGP_SPRETEiJ_G0010787
 pseudogene Chr18:35663982-35664822 (+)
WSB/EiJ MGP_WSBEiJ_G0011134
 pseudogene Chr18:35318476-35319346 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    21
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000103483 Ensembl Gene Model | MGI Sequence Detail 871 C57BL/6J ±  kb
transcript ENSMUST00000193629 Ensembl | MGI Sequence Detail 871 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 5
    Phenotypes 2
  • Earliest
    J:244163 Hasegawa S, et al., Distinct and Cooperative Functions for the Protocadherin-alpha, -beta and -gamma Clusters in Neuronal Survival and Axon Targeting. Front Mol Neurosci. 2016;9:155
  • Latest
    J:313451 Xu L, et al., Abnormal neocortex arealization and Sotos-like syndrome-associated behavior in Setd2 mutant mice. Sci Adv. 2021 Jan;7(1)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory