Gm20128 Pseudogene Detail

Summary

• Symbol
  Gm20128
• Name
  predicted gene, 20128

• Feature Type
  pseudogene
• IDs
  MGI:5012313
  NCBI Gene: 100504238
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:58312122-58312538 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 28.51 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  75 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012313	pseudogene	Chr3:58312081-58312538 (+)
129S1/SvImJ	ENSMUSG00200023351	pseudogene	Chr3:55188518-55188934 (+)
A/J	ENSMUSG00195032371	pseudogene	Chr3:55100183-55100599 (+)
AKR/J	ENSMUSG00220030480	pseudogene	Chr3:55157748-55158164 (+)
BALB/cJ	ENSMUSG00180026170	pseudogene	Chr3:55180037-55180453 (+)
C3H/HeJ	ENSMUSG00175008746	pseudogene	Chr3:55021393-55021809 (+)
C57BL/6NJ	ENSMUSG00215008827	pseudogene	Chr3:55468873-55469289 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010865	pseudogene	Chr3:51802880-51803277 (+)
CAST/EiJ	ENSTCUG00005002449	pseudogene	Chr3:54778110-54778526 (+)
CBA/J	ENSMUSG00210003619	pseudogene	Chr3:55137098-55137514 (+)
DBA/2J	ENSMUSG00185028237	pseudogene	Chr3:55307104-55307520 (+)
FVB/NJ	ENSMUSG00205003840	pseudogene	Chr3:54293406-54293822 (+)
JF1/MsJ	ENSUMUG00000003210	pseudogene	Chr3:54713144-54713560 (+)
LP/J	ENSMUSG00230004762	pseudogene	Chr3:57320179-57320595 (+)
NOD/ShiLtJ	ENSMUSG00190032422	pseudogene	Chr3:55498143-55498559 (+)
NZO/HlLtJ	ENSMUSG00225018934	pseudogene	Chr3:59932660-59933076 (+)
PWK/PhJ	ENSLUMG00010005398	pseudogene	Chr3:54827016-54827432 (+)
SPRET/EiJ	ENSMSPG00010007861	pseudogene	Chr3:55660518-55660934 (+)
WSB/EiJ	ENSIUOG00005009061	pseudogene	Chr3:55268515-55268931 (+)

Homology

• Gene Tree
  Gm20128
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm20128
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000105154 (Evidence)
• NCBI Gene
  100504238

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105154	Ensembl Gene Model | MGI Sequence Detail	417	C57BL/6J
transcript	ENSMUST00000196189	Ensembl | MGI Sequence Detail	417	Not Applicable

References

• Summaries
  All 6

  Diseases 1

  Phenotypes 2
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426