Gm20045 Gene Detail

Summary

• Symbol
  Gm20045
• Name
  predicted gene, 20045

• Feature Type
  lncRNA gene
• IDs
  MGI:5012230
  NCBI Gene: 105244007
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:171148169-171153745 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 79.33 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  237 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012230	lncRNA gene	Chr1:171148169-171154882 (-)
129S1/SvImJ	ENSMUSG00200048011	lncRNA gene	Chr1:168630708-168636296 (-)
A/J	ENSMUSG00195049074	lncRNA gene	Chr1:167981825-167987400 (-)
AKR/J	ENSMUSG00220031921	lncRNA gene	Chr1:167732110-167737685 (-)
BALB/cJ	ENSMUSG00180046087	lncRNA gene	Chr1:168270967-168276554 (-)
C3H/HeJ	ENSMUSG00175047347	lncRNA gene	Chr1:168282055-168287642 (-)
C57BL/6NJ	ENSMUSG00215044653	lncRNA gene	Chr1:168104982-168110560 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004563	lincRNA gene	Chr1:161581917-161587956 (-)
CAST/EiJ	ENSTCUG00005047274	lncRNA gene	Chr1:166615761-166621773 (-)
CBA/J	ENSMUSG00210044506	lncRNA gene	Chr1:168159004-168164592 (-)
DBA/2J	ENSMUSG00185032312	lncRNA gene	Chr1:172472953-172478541 (-)
FVB/NJ	ENSMUSG00205039033	lncRNA gene	Chr1:167167997-167173584 (-)
JF1/MsJ	ENSUMUG00000013320	lncRNA gene	Chr1:171601889-171607469 (-)
LP/J	ENSMUSG00230027239	lncRNA gene	Chr1:172047828-172053415 (-)
NOD/ShiLtJ	ENSMUSG00190043684	lncRNA gene	Chr1:167953869-167959455 (-)
NZO/HlLtJ	ENSMUSG00225005169	lncRNA gene	Chr1:175665373-175670948 (-)
PWK/PhJ	ENSLUMG00010034231	lncRNA gene	Chr1:166948597-166954172 (-)
SPRET/EiJ	ENSMSPG00010049016	lncRNA gene	Chr1:170481342-170486993 (-)
WSB/EiJ	ENSIUOG00005040967	lncRNA gene	Chr1:167368265-167373853 (-)

Homology

• Gene Tree
  Gm20045
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm20045
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000103983 (Evidence)
• NCBI Gene
  105244007

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103983	Ensembl Gene Model | MGI Sequence Detail	5577	C57BL/6J
transcript	ENSMUST00000192658	Ensembl | MGI Sequence Detail	5577	Not Applicable

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;