Gm19987 Pseudogene Detail

Summary

• Symbol
  Gm19987
• Name
  predicted gene, 19987

• Feature Type
  pseudogene
• IDs
  MGI:5012172
  NCBI Gene: 100503958
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:68328688-68329186 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 37.30 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  201 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012172	pseudogene	Chr9:68328687-68332593 (-)
129S1/SvImJ	ENSMUSG00200044331	pseudogene	Chr9:65415872-65416368 (-)
A/J	ENSMUSG00195027528	pseudogene	Chr9:65185302-65185800 (-)
AKR/J	ENSMUSG00220043886	pseudogene	Chr9:65329175-65329673 (-)
BALB/cJ	ENSMUSG00180019791	pseudogene	Chr9:65304813-65305311 (-)
C3H/HeJ	ENSMUSG00175013475	pseudogene	Chr9:65318691-65319189 (-)
C57BL/6NJ	ENSMUSG00215034451	pseudogene	Chr9:65271546-65272044 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033720	pseudogene	Chr9:65150627-65151122 (-)
CBA/J	ENSMUSG00210014585	pseudogene	Chr9:65399477-65399975 (-)
DBA/2J	ENSMUSG00185034472	pseudogene	Chr9:65423183-65423681 (-)
FVB/NJ	ENSMUSG00205038651	pseudogene	Chr9:65702902-65703400 (-)
JF1/MsJ	ENSUMUG00000040485	pseudogene	Chr9:65459644-65460140 (-)
LP/J	ENSMUSG00230028314	pseudogene	Chr9:65614788-65615284 (-)
NOD/ShiLtJ	ENSMUSG00190023953	pseudogene	Chr9:65526509-65527007 (-)
NZO/HlLtJ	ENSMUSG00225047136	pseudogene	Chr9:65722699-65723197 (-)
PWK/PhJ	ENSLUMG00010028551	pseudogene	Chr9:65400870-65401366 (-)
SPRET/EiJ	ENSMSPG00010023509	pseudogene	Chr9:66489398-66489897 (-)
WSB/EiJ	ENSIUOG00005028559	pseudogene	Chr9:64887837-64888333 (-)

Homology

• Gene Tree
  Gm19987
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm19987
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000111562 (Evidence)
• NCBI Gene
  100503958

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111562	Ensembl Gene Model | MGI Sequence Detail	499	C57BL/6J
transcript	ENSMUST00000216339	Ensembl | MGI Sequence Detail	499	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;