Gm19936 Pseudogene Detail

Summary

• Symbol
  Gm19936
• Name
  predicted gene, 19936

• Feature Type
  pseudogene
• IDs
  MGI:5012121
  NCBI Gene: 100503870
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:56839715-56840552 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 30.51 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012121	pseudogene	Chr9:56838472-56841216 (-)
129S1/SvImJ	ENSMUSG00200036005	pseudogene	Chr9:53954078-53954915 (-)
A/J	ENSMUSG00195043031	pseudogene	Chr9:53652752-53653589 (-)
AKR/J	ENSMUSG00220033332	pseudogene	Chr9:53789974-53790811 (-)
BALB/cJ	ENSMUSG00180019128	pseudogene	Chr9:53778805-53779642 (-)
C3H/HeJ	ENSMUSG00175022681	pseudogene	Chr9:53779583-53780420 (-)
C57BL/6NJ	ENSMUSG00215032760	pseudogene	Chr9:53772153-53772990 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005021545	pseudogene	Chr9:53679047-53679885 (-)
CBA/J	ENSMUSG00210041681	pseudogene	Chr9:53881239-53882076 (-)
DBA/2J	ENSMUSG00185043082	pseudogene	Chr9:53909993-53910830 (-)
FVB/NJ	ENSMUSG00205041723	pseudogene	Chr9:54222708-54223545 (-)
JF1/MsJ	ENSUMUG00000048322	pseudogene	Chr9:53931782-53932619 (-)
LP/J	ENSMUSG00230039255	pseudogene	Chr9:54153877-54154714 (-)
NOD/ShiLtJ	ENSMUSG00190043902	pseudogene	Chr9:53977995-53978832 (-)
NZO/HlLtJ	ENSMUSG00225028658	pseudogene	Chr9:54191173-54192010 (-)
PWK/PhJ	ENSLUMG00010041012	pseudogene	Chr9:53894308-53895145 (-)
SPRET/EiJ	ENSMSPG00010029753	pseudogene	Chr9:54923386-54924222 (-)
WSB/EiJ	ENSIUOG00005042397	pseudogene	Chr9:53391989-53392826 (-)

Homology

• Gene Tree
  Gm19936
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000110930 (Evidence)
• NCBI Gene
  100503870

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110930	Ensembl Gene Model | MGI Sequence Detail	838	C57BL/6J
transcript	ENSMUST00000216414	Ensembl | MGI Sequence Detail	838	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;