Gm19883 Pseudogene Detail

Summary

• Symbol
  Gm19883
• Name
  predicted gene, 19883

• Feature Type
  pseudogene
• IDs
  MGI:5012068
  NCBI Gene: 100503766
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:28041095-28041575 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 10.71 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  139 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012068	pseudogene	Chr15:28041095-28041609 (+)
129S1/SvImJ	ENSMUSG00200028054	pseudogene	Chr15:25038547-25039027 (+)
A/J	ENSMUSG00195014255	pseudogene	Chr15:24991759-24992239 (+)
AKR/J	ENSMUSG00220047943	pseudogene	Chr15:24855177-24855657 (+)
BALB/cJ	ENSMUSG00180005483	pseudogene	Chr15:24935071-24935551 (+)
C3H/HeJ	ENSMUSG00175004981	pseudogene	Chr15:25090794-25091274 (+)
C57BL/6NJ	ENSMUSG00215005471	pseudogene	Chr15:24991150-24991630 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015213	pseudogene	Chr15:25040677-25041157 (+)
CBA/J	ENSMUSG00210024716	pseudogene	Chr15:25037515-25037995 (+)
DBA/2J	ENSMUSG00185023712	pseudogene	Chr15:25030117-25030597 (+)
FVB/NJ	ENSMUSG00205014766	pseudogene	Chr15:24973925-24974405 (+)
JF1/MsJ	ENSUMUG00000014041	pseudogene	Chr15:25046567-25047055 (+)
LP/J	ENSMUSG00230015409	pseudogene	Chr15:28508050-28508530 (+)
NOD/ShiLtJ	ENSMUSG00190012326	pseudogene	Chr15:25013871-25014351 (+)
NZO/HlLtJ	ENSMUSG00225031867	pseudogene	Chr15:28750946-28751426 (+)
PWK/PhJ	ENSLUMG00010022574	pseudogene	Chr15:25173842-25174330 (+)
SPRET/EiJ	ENSMSPG00010025513	pseudogene	Chr15:25642397-25642889 (+)
WSB/EiJ	ENSIUOG00005022281	pseudogene	Chr15:25031388-25031868 (+)

Homology

• Gene Tree
  Gm19883
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm19883
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000115058 (Evidence)
• NCBI Gene
  100503766

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115058	Ensembl Gene Model | MGI Sequence Detail	481	C57BL/6J
transcript	ENSMUST00000227963	Ensembl | MGI Sequence Detail	481	Not Applicable

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6