Gm19867 Pseudogene Detail

Summary

• Symbol
  Gm19867
• Name
  predicted gene, 19867

• Feature Type
  pseudogene
• IDs
  MGI:5012052
  NCBI Gene: 100503744
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:80523554-80524038 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 45.89 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  136 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012052	pseudogene	Chr16:80523520-80524077 (+)
129S1/SvImJ	ENSMUSG00200015916	pseudogene	Chr16:77417601-77418085 (+)
A/J	ENSMUSG00195023837	pseudogene	Chr16:77185710-77186194 (+)
AKR/J	ENSMUSG00220017998	pseudogene	Chr16:77371493-77371977 (+)
BALB/cJ	ENSMUSG00180002240	pseudogene	Chr16:77258123-77258607 (+)
C3H/HeJ	ENSMUSG00175009127	pseudogene	Chr16:77556013-77556497 (+)
C57BL/6NJ	ENSMUSG00215001668	pseudogene	Chr16:77383724-77384208 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005007708	pseudogene	Chr16:77125607-77126091 (+)
CBA/J	ENSMUSG00210020037	pseudogene	Chr16:77484292-77484776 (+)
DBA/2J	ENSMUSG00185005221	pseudogene	Chr16:77424170-77424654 (+)
FVB/NJ	ENSMUSG00205016764	pseudogene	Chr16:77260810-77261294 (+)
JF1/MsJ	ENSUMUG00000012462	pseudogene	Chr16:77541946-77542430 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190011068	pseudogene	Chr16:77412752-77413236 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010005285	pseudogene	Chr16:77218647-77219131 (+)
SPRET/EiJ	ENSMSPG00010015360	pseudogene	Chr16:78236123-78236402 (+)
WSB/EiJ	ENSIUOG00005017413	pseudogene	Chr16:77384227-77384711 (+)

Homology

• Gene Tree
  Gm19867
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  3
• Targeted
  2
• Genomic Mutations
  3 involving Gm19867
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000116559 (Evidence)
• NCBI Gene
  100503744

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116559	Ensembl Gene Model | MGI Sequence Detail	485	C57BL/6J
transcript	ENSMUST00000231837	Ensembl | MGI Sequence Detail	485	Not Applicable

References

• Summaries
  All 10

  Diseases 1

  Phenotypes 7
• Earliest
  J:117029 Davisson M, et al., Impact of trisomy on fertility and meiosis in male mice. Hum Reprod. 2007 Feb;22(2):468-76
• Latest
  J:339533 Duchon A, et al., Multi-influential genetic interactions alter behaviour and cognition through six main biological cascades in Down syndrome mouse models. Hum Mol Genet. 2021 May 28;30(9):771-788