Gm19840 Pseudogene Detail

Summary

• Symbol
  Gm19840
• Name
  predicted gene, 19840

• Feature Type
  pseudogene
• IDs
  MGI:5012025
  NCBI Gene: 100503698
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:22935573-22937327 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 8.73 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  227 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012025	pseudogene	Chr15:22906716-22937342 (+)
129S1/SvImJ	ENSMUSG00200004552	pseudogene	Chr15:19944752-19946506 (+)
A/J	ENSMUSG00195011874	pseudogene	Chr15:20289404-20289917 (+)
AKR/J	ENSMUSG00220001707	pseudogene	Chr15:19736915-19738669 (+)
BALB/cJ	ENSMUSG00180010001	pseudogene	Chr15:19841876-19843630 (+)
C3H/HeJ	ENSMUSG00175002018	pseudogene	Chr15:19951133-19952887 (+)
C57BL/6NJ	ENSMUSG00215008332	pseudogene	Chr15:19879852-19881606 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010009	pseudogene	Chr15:18578945-18580740 (+)
CAST/EiJ	ENSTCUG00005002680	pseudogene	Chr15:19953189-19954941 (+)
CBA/J	ENSMUSG00210005022	pseudogene	Chr15:19941074-19942828 (+)
DBA/2J	ENSMUSG00185003489	pseudogene	Chr15:19933626-19935380 (+)
FVB/NJ	ENSMUSG00205011003	pseudogene	Chr15:19863998-19865752 (+)
JF1/MsJ	ENSUMUG00000014290	pseudogene	Chr15:20003178-20004932 (+)
LP/J	ENSMUSG00230016070	pseudogene	Chr15:23420432-23422186 (+)
NOD/ShiLtJ	ENSMUSG00190001851	pseudogene	Chr15:19900012-19901766 (+)
NZO/HlLtJ	ENSMUSG00225032127	pseudogene	Chr15:23664840-23666594 (+)
PWK/PhJ	ENSLUMG00010015031	pseudogene	Chr15:20123247-20125002 (+)
SPRET/EiJ	ENSMSPG00010001071	pseudogene	Chr15:20415025-20416767 (+)
WSB/EiJ	ENSIUOG00005012270	pseudogene	Chr15:19930193-19931945 (+)

Homology

• Gene Tree
  Gm19840
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm19840
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000091194 (Evidence)
• NCBI Gene
  100503698

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091194	Ensembl Gene Model | MGI Sequence Detail	1755	C57BL/6J
transcript	ENSMUST00000169624	Ensembl | MGI Sequence Detail	882	Not Applicable

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6