Gm19810 Pseudogene Detail

Summary

• Symbol
  Gm19810
• Name
  predicted gene, 19810

• Feature Type
  pseudogene
• IDs
  MGI:5011995
  NCBI Gene: 102632476
• Alliance
  genome feature page
• Transcription Start Sites
  4 TSS

Location &
Maps

• Sequence Map
  Chr10:79724546-79724796 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 39.72 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  85 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011995	pseudogene	Chr10:79724501-79724848 (+)
129S1/SvImJ	ENSMUSG00200051439	pseudogene	Chr10:76348215-76348465 (+)
A/J	ENSMUSG00195049802	pseudogene	Chr10:76743708-76743958 (+)
AKR/J	ENSMUSG00220048861	pseudogene	Chr10:76341273-76341523 (+)
BALB/cJ	ENSMUSG00180053203	pseudogene	Chr10:76754194-76754444 (+)
C3H/HeJ	ENSMUSG00175053008	pseudogene	Chr10:76624931-76625181 (+)
C57BL/6NJ	ENSMUSG00215053106	pseudogene	Chr10:76366622-76366872 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005051651	pseudogene	Chr10:76251386-76251635 (+)
CBA/J	ENSMUSG00210050051	pseudogene	Chr10:76481014-76481264 (+)
DBA/2J	ENSMUSG00185053497	pseudogene	Chr10:76823395-76823645 (+)
FVB/NJ	ENSMUSG00205052041	pseudogene	Chr10:76536186-76536436 (+)
JF1/MsJ	ENSUMUG00000056358	pseudogene	Chr10:78053728-78053978 (+)
LP/J	ENSMUSG00230051429	pseudogene	Chr10:78593139-78593389 (+)
NOD/ShiLtJ	ENSMUSG00190053066	pseudogene	Chr10:76737144-76737394 (+)
NZO/HlLtJ	ENSMUSG00225052730	pseudogene	Chr10:82879499-82879749 (+)
PWK/PhJ	ENSLUMG00010051953	pseudogene	Chr10:76413244-76413494 (+)
SPRET/EiJ	ENSMSPG00010048092	pseudogene	Chr10:78033863-78034113 (+)
WSB/EiJ	ENSIUOG00005052050	pseudogene	Chr10:76441250-76441500 (+)

Homology

• Gene Tree
  Gm19810
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm19810
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000111897 (Evidence)
• NCBI Gene
  102632476

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111897	Ensembl Gene Model | MGI Sequence Detail	251	C57BL/6J
transcript	ENSMUST00000218521	Ensembl | MGI Sequence Detail	251	Not Applicable

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87

TSS for Gm19810:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr94425	Chr10:79723459-79723478 (+)	-1,077 bp
Tssr94426	Chr10:79723498-79723519 (+)	-1,037 bp
Tssr94427	Chr10:79723751-79723759 (+)	-791 bp
Tssr94428	Chr10:79724500-79724501 (+)	-45 bp