Gm19710 Gene Detail

Summary

• Symbol
  Gm19710
• Name
  predicted gene, 19710

• Feature Type
  lncRNA gene
• IDs
  MGI:5011895
  NCBI Gene: 100503469
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:89906067-89908632 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 39.19 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  69 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011895	lncRNA gene	Chr3:89906036-89928752 (+)
129S1/SvImJ	ENSMUSG00200039783	lncRNA gene	Chr3:86761399-86784083 (+)
A/J	ENSMUSG00195053513	lncRNA gene	Chr3:86776557-86799244 (+)
AKR/J	ENSMUSG00220051824	lncRNA gene	Chr3:86731064-86753750 (+)
BALB/cJ	ENSMUSG00180049915	lncRNA gene	Chr3:86868341-86891025 (+)
C3H/HeJ	ENSMUSG00175048023	lncRNA gene	Chr3:86709116-86731801 (+)
C57BL/6NJ	ENSMUSG00215050063	lncRNA gene	Chr3:87149172-87171858 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005672	lincRNA gene	Chr3:82759660-82782212 (+)
CAST/EiJ	ENSTCUG00005048408	lncRNA gene	Chr3:86228597-86251294 (+)
CBA/J	ENSMUSG00210048740	lncRNA gene	Chr3:86846767-86869453 (+)
DBA/2J	ENSMUSG00185053456	lncRNA gene	Chr3:86956761-86979444 (+)
FVB/NJ	ENSMUSG00205050016	lncRNA gene	Chr3:85770755-85793443 (+)
JF1/MsJ	ENSUMUG00000052437	lncRNA gene	Chr3:86569773-86591507 (+)
LP/J	ENSMUSG00230036368	lncRNA gene	Chr3:88982644-89005328 (+)
NOD/ShiLtJ	ENSMUSG00190051073	lncRNA gene	Chr3:87235354-87258036 (+)
NZO/HlLtJ	ENSMUSG00225012370	lncRNA gene	Chr3:91740864-91763547 (+)
PWK/PhJ	ENSLUMG00010052902	lncRNA gene	Chr3:86602192-86624883 (+)
SPRET/EiJ	ENSMSPG00010051029	lncRNA gene	Chr3:87474205-87496922 (+)
WSB/EiJ	ENSIUOG00005050449	lncRNA gene	Chr3:87262209-87284890 (+)

Homology

• Gene Tree
  Gm19710
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  7
• Chemically induced (other)
  1
• Gene trapped
  5
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm19710
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  1

• Ensembl
  ENSMUSG00000105552 (Evidence)
• NCBI Gene
  100503469

Representative Sequences			Length	Strain/Species
genomic	100503469	NCBI Gene Model | MGI Sequence Detail	2566	C57BL/6J
transcript	NR_045749	RefSeq | MGI Sequence Detail	640	ZRU/MplStud

Molecular
Reagents

• All nucleic 3

  cDNA 3

References

• Summaries
  All 13

  Diseases 1

  Phenotypes 7
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for Gm19710:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr30146	Chr3:89908143-89908153 (+)	2,081 bp