Gm19709 Pseudogene Detail

Summary

• Symbol
  Gm19709
• Name
  predicted gene, 19709

• Feature Type
  pseudogene
• IDs
  MGI:5011894
  NCBI Gene: 100503466
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:38697586-38698067 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 20.90 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  227 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011894	pseudogene	Chr9:38697553-38698073 (-)
129S1/SvImJ	ENSMUSG00200039999	pseudogene	Chr9:35728239-35728720 (-)
A/J	ENSMUSG00195051121	pseudogene	Chr9:35510827-35511308 (-)
AKR/J	ENSMUSG00220046609	pseudogene	Chr9:35612579-35613060 (-)
BALB/cJ	ENSMUSG00180046790	pseudogene	Chr9:35638923-35639404 (-)
C3H/HeJ	ENSMUSG00175048925	pseudogene	Chr9:35640111-35640592 (-)
C57BL/6NJ	ENSMUSG00215033373	pseudogene	Chr9:35605465-35605946 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005044950	pseudogene	Chr9:35564104-35564585 (-)
CBA/J	ENSMUSG00210046217	pseudogene	Chr9:35670014-35670495 (-)
DBA/2J	ENSMUSG00185037783	pseudogene	Chr9:35750479-35750960 (-)
FVB/NJ	ENSMUSG00205040987	pseudogene	Chr9:35986928-35987409 (-)
JF1/MsJ	ENSUMUG00000047123	pseudogene	Chr9:35829589-35830070 (-)
LP/J	ENSMUSG00230034798	pseudogene	Chr9:36048061-36048542 (-)
NOD/ShiLtJ	ENSMUSG00190031362	pseudogene	Chr9:35802650-35803131 (-)
NZO/HlLtJ	ENSMUSG00225022131	pseudogene	Chr9:36016415-36016896 (-)
PWK/PhJ	ENSLUMG00010049305	pseudogene	Chr9:35773463-35773944 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005044244	pseudogene	Chr9:35287568-35288049 (-)

Homology

• Gene Tree
  Gm19709
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000111188 (Evidence)
• NCBI Gene
  100503466

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111188	Ensembl Gene Model | MGI Sequence Detail	482	C57BL/6J
transcript	ENSMUST00000215403	Ensembl | MGI Sequence Detail	482	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;