Gm19708 Gene Detail

Summary

• Symbol
  Gm19708
• Name
  predicted gene, 19708
• Synonyms
  Gm31738

• Feature Type
  lncRNA gene
• IDs
  MGI:5011893
  NCBI Gene: 102634060
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:137706631-137738455 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 64.01 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1372 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011893	lncRNA gene	Chr3:137649524-137738455 (+)
129S1/SvImJ	ENSMUSG00200003047	lncRNA gene	Chr3:134497997-134529680 (+)
A/J	ENSMUSG00195004611	lncRNA gene	Chr3:134606355-134638282 (+)
AKR/J	ENSMUSG00220004207	lncRNA gene	Chr3:133057021-133088686 (+)
BALB/cJ	ENSMUSG00180012384	lncRNA gene	Chr3:134520493-134552425 (+)
C3H/HeJ	ENSMUSG00175020063	lncRNA gene	Chr3:134123834-134155767 (+)
C57BL/6NJ	ENSMUSG00215024827	lncRNA gene	Chr3:134865646-134897467 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005755	lincRNA gene	Chr3:131151004-131166948 (+)
CAST/EiJ	ENSTCUG00005029833	lncRNA gene	Chr3:135207272-135239047 (+)
CBA/J	ENSMUSG00210033153	lncRNA gene	Chr3:134733677-134765607 (+)
DBA/2J	ENSMUSG00185003604	lncRNA gene	Chr3:135350805-135382507 (+)
FVB/NJ	ENSMUSG00205023298	lncRNA gene	Chr3:133658545-133690214 (+)
JF1/MsJ	ENSUMUG00000005751	lncRNA gene	Chr3:134117617-134149576 (+)
LP/J	ENSMUSG00230003552	lncRNA gene	Chr3:137311718-137343401 (+)
NOD/ShiLtJ	ENSMUSG00190004742	lncRNA gene	Chr3:135732170-135763843 (+)
NZO/HlLtJ	ENSMUSG00225006295	lncRNA gene	Chr3:139779723-139811409 (+)
PWK/PhJ	ENSLUMG00010022231	lncRNA gene	Chr3:134035022-134066855 (+)
SPRET/EiJ	ENSMSPG00010014346	lncRNA gene	Chr3:135203357-135235139 (+)
WSB/EiJ	ENSIUOG00005019722	lncRNA gene	Chr3:134889728-134921688 (+)

Homology

• Gene Tree
  Gm19708
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm19708
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  32
• RefSeq
  3

• Ensembl
  ENSMUSG00000105296 (Evidence)
• NCBI Gene
  102634060

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105296	Ensembl Gene Model | MGI Sequence Detail	31825	C57BL/6J
transcript	ENSMUST00000199386	Ensembl | MGI Sequence Detail	2939	Not Applicable

Other
Accession IDs

MGI:5590897

References

• Summaries
  All 9

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for Gm19708:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr31935	Chr3:137706630-137706670 (+)	19 bp