Gm19619 Gene Detail

Summary

• Symbol
  Gm19619
• Name
  predicted gene, 19619

• Feature Type
  lncRNA gene
• IDs
  MGI:5011804
  NCBI Gene: 100503265
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:91405430-91430935 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 44.78 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  753 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011804	lncRNA gene	Chr5:91399459-91455916 (-)
129S1/SvImJ	ENSMUSG00200010051	lncRNA gene	Chr5:87126866-87158704 (-)
A/J	ENSMUSG00195026132	lncRNA gene	Chr5:86300453-86332285 (-)
AKR/J	ENSMUSG00220012438	lncRNA gene	Chr5:86424971-86456769 (-)
BALB/cJ	ENSMUSG00180026213	lncRNA gene	Chr5:86138885-86170689 (-)
C3H/HeJ	ENSMUSG00175045291	lncRNA gene	Chr5:88234487-88266287 (-)
C57BL/6NJ	ENSMUSG00215031519	lncRNA gene	Chr5:86999574-87031399 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006086	lincRNA gene	Chr5:84387315-84414419 (-)
CAST/EiJ	ENSTCUG00005038812	lncRNA gene	Chr5:85880777-85906642 (-)
CBA/J	ENSMUSG00210006622	lncRNA gene	Chr5:87034238-87066030 (-)
DBA/2J	ENSMUSG00185040827	lncRNA gene	Chr5:88955199-88986995 (-)
FVB/NJ	ENSMUSG00205031803	lncRNA gene	Chr5:85844252-85881078 (-)
JF1/MsJ	ENSUMUG00000044490	lncRNA gene	Chr5:93233388-93266165 (-)
LP/J	ENSMUSG00230028104	lncRNA gene	Chr5:93653203-93685028 (-)
NOD/ShiLtJ	ENSMUSG00190044076	lncRNA gene	Chr5:85916725-85948518 (-)
NZO/HlLtJ	ENSMUSG00225009559	lncRNA gene	Chr5:98800705-98832529 (-)
PWK/PhJ	ENSLUMG00010031105	lncRNA gene	Chr5:85905355-85938107 (-)
SPRET/EiJ	ENSMSPG00010037628	lncRNA gene	Chr5:88290438-88323959 (-)
WSB/EiJ	ENSIUOG00005030458	lncRNA gene	Chr5:88925005-88956839 (-)

Homology

• Gene Tree
  Gm19619
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  2
• Radiation induced
  1
• Spontaneous
  1
• Genomic Mutations
  4 involving Gm19619
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  45
• RefSeq
  1

• Ensembl
  ENSMUSG00000107198 (Evidence)
• NCBI Gene
  100503265

Representative Sequences			Length	Strain/Species
genomic	100503265	NCBI Gene Model | MGI Sequence Detail	25506	C57BL/6J
transcript	NR_040428	RefSeq | MGI Sequence Detail	2856	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 12

  Phenotypes 6
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:340199 Fang Z, et al., Downregulation of hepatic lncRNA Gm19619 improves gluconeogenesis and lipogenesis following vertical sleeve gastrectomy in mice. Commun Biol. 2023 Jan 27;6(1):105

TSS for Gm19619:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr51819	Chr5:91430904-91430916 (-)	25 bp