Gm19572 Pseudogene Detail

Summary

• Symbol
  Gm19572
• Name
  predicted gene, 19572

• Feature Type
  pseudogene
• IDs
  MGI:5011757
  NCBI Gene: 100503143
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:77758990-77759327 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 43.36 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  152 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011757	pseudogene	Chr9:77758990-77759327 (+)
129S1/SvImJ	ENSMUSG00200019887	pseudogene	Chr9:74902207-74902544 (+)
A/J	ENSMUSG00195011213	pseudogene	Chr9:74674913-74675250 (+)
AKR/J	ENSMUSG00220015365	pseudogene	Chr9:74807671-74808008 (+)
BALB/cJ	ENSMUSG00180018370	pseudogene	Chr9:74788414-74788751 (+)
C3H/HeJ	ENSMUSG00175011660	pseudogene	Chr9:74820919-74821256 (+)
C57BL/6NJ	ENSMUSG00215021917	pseudogene	Chr9:74718574-74718911 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009724	pseudogene	Chr9:74464653-74464990 (+)
CBA/J	ENSMUSG00210013264	pseudogene	Chr9:74873860-74874197 (+)
DBA/2J	ENSMUSG00185007434	pseudogene	Chr9:74908608-74908945 (+)
FVB/NJ	ENSMUSG00205028335	pseudogene	Chr9:75177050-75177387 (+)
JF1/MsJ	ENSUMUG00000038614	pseudogene	Chr9:74858850-74859187 (+)
LP/J	ENSMUSG00230025830	pseudogene	Chr9:75053853-75054190 (+)
NOD/ShiLtJ	ENSMUSG00190040060	pseudogene	Chr9:75011069-75011406 (+)
NZO/HlLtJ	ENSMUSG00225025655	pseudogene	Chr9:75206550-75206887 (+)
PWK/PhJ	ENSLUMG00010016021	pseudogene	Chr9:74782376-74782713 (+)
SPRET/EiJ	ENSMSPG00010004356	pseudogene	Chr9:76028661-76028985 (+)
WSB/EiJ	ENSIUOG00005027781	pseudogene	Chr9:74333368-74333692 (+)

Homology

• Gene Tree
  Gm19572
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm19572
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000111580 (Evidence)
• NCBI Gene
  100503143

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111580	Ensembl Gene Model | MGI Sequence Detail	338	C57BL/6J
transcript	ENSMUST00000214326	Ensembl | MGI Sequence Detail	338	Not Applicable

References

• Summaries
  All 10

  Phenotypes 7
• Earliest
  J:12013 Russell LB, Definition of functional units in a small chromosomal segment of the mouse and its use in interpreting the nature of radiation-induced mutations. Mutat Res. 1971 Jan;11(1):107-23
• Latest
  J:29898 Avraham KB, et al., The mouse Snell's waltzer deafness gene encodes an unconventional myosin required for structural integrity of inner ear hair cells. Nat Genet. 1995 Dec;11(4):369-75