Gm19569 Gene Detail

Summary

• Symbol
  Gm19569
• Name
  predicted gene, 19569

• Feature Type
  lncRNA gene
• IDs
  MGI:5011754
  NCBI Gene: 100503134
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:77452241-77453749 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 43.36 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  126 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011754	lncRNA gene	Chr9:77452241-77453749 (+)
129S1/SvImJ	ENSMUSG00200020047	lncRNA gene	Chr9:74594992-74596500 (+)
A/J	ENSMUSG00195011499	lncRNA gene	Chr9:74358044-74359552 (+)
AKR/J	ENSMUSG00220015581	lncRNA gene	Chr9:74490799-74492307 (+)
BALB/cJ	ENSMUSG00180021241	lncRNA gene	Chr9:74471561-74473069 (+)
C3H/HeJ	ENSMUSG00175012503	lncRNA gene	Chr9:74504066-74505574 (+)
C57BL/6NJ	ENSMUSG00215021380	lncRNA gene	Chr9:74411090-74412598 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013866	unclassified non-coding RNA gene	Chr9:74524594-74526107 (+)
CAST/EiJ	ENSTCUG00005010165	lncRNA gene	Chr9:74160497-74162001 (+)
CBA/J	ENSMUSG00210013513	lncRNA gene	Chr9:74557019-74558527 (+)
DBA/2J	ENSMUSG00185008197	lncRNA gene	Chr9:74591741-74593249 (+)
FVB/NJ	ENSMUSG00205031798	lncRNA gene	Chr9:74860173-74861681 (+)
JF1/MsJ	ENSUMUG00000040829	lncRNA gene	Chr9:74548064-74549568 (+)
LP/J	ENSMUSG00230025952	lncRNA gene	Chr9:74746656-74748164 (+)
NOD/ShiLtJ	ENSMUSG00190037904	lncRNA gene	Chr9:74694206-74695714 (+)
NZO/HlLtJ	ENSMUSG00225025748	lncRNA gene	Chr9:74889728-74891236 (+)
PWK/PhJ	ENSLUMG00010016447	lncRNA gene	Chr9:74483528-74485038 (+)
SPRET/EiJ	ENSMSPG00010004283	lncRNA gene	Chr9:75721259-75722753 (+)
WSB/EiJ	ENSIUOG00005027670	lncRNA gene	Chr9:74023028-74024536 (+)

Homology

• Gene Tree
  Gm19569
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm19569
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000099094 (Evidence)
• NCBI Gene
  100503134

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099094	Ensembl Gene Model | MGI Sequence Detail	1509	C57BL/6J
transcript	ENSMUST00000184658	Ensembl | MGI Sequence Detail	1305	Not Applicable

References

• Summaries
  All 11

  Phenotypes 7
• Earliest
  J:12013 Russell LB, Definition of functional units in a small chromosomal segment of the mouse and its use in interpreting the nature of radiation-induced mutations. Mutat Res. 1971 Jan;11(1):107-23
• Latest
  J:29898 Avraham KB, et al., The mouse Snell's waltzer deafness gene encodes an unconventional myosin required for structural integrity of inner ear hair cells. Nat Genet. 1995 Dec;11(4):369-75