Gm19505 Pseudogene Detail

Summary

• Symbol
  Gm19505
• Name
  predicted gene, 19505

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:5011690
  NCBI Gene: 100503014
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:6077568-6077895 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 4.34 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011690	pseudogene	Chr19:6077562-6078431 (-)
129S1/SvImJ	ENSMUSG00200053375	pseudogene	Chr19:2839985-2840312 (-)
A/J	ENSMUSG00195053167	pseudogene	Chr19:3239471-3239798 (-)
AKR/J	ENSMUSG00220050315	pseudogene	Chr19:3012582-3012909 (-)
BALB/cJ	ENSMUSG00180051953	pseudogene	Chr19:3614191-3614518 (-)
C3H/HeJ	ENSMUSG00175014130	pseudogene	Chr19:2864359-2864686 (-)
C57BL/6NJ	ENSMUSG00215048489	pseudogene	Chr19:3078317-3078644 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005043263	pseudogene	Chr19:2997542-2997869 (-)
CBA/J	ENSMUSG00210050251	pseudogene	Chr19:2867097-2867424 (-)
DBA/2J	ENSMUSG00185053969	pseudogene	Chr19:3243583-3243910 (-)
FVB/NJ	ENSMUSG00205053410	pseudogene	Chr19:3245372-3245699 (-)
JF1/MsJ	ENSUMUG00000056928	pseudogene	Chr19:3212056-3212383 (-)
LP/J	ENSMUSG00230054307	pseudogene	Chr19:4146871-4147198 (-)
NOD/ShiLtJ	ENSMUSG00190051991	pseudogene	Chr19:2773942-2774269 (-)
NZO/HlLtJ	ENSMUSG00225026859	pseudogene	Chr19:7855683-7856010 (-)
PWK/PhJ	ENSLUMG00010008147	pseudogene	Chr19:2979674-2980001 (-)
SPRET/EiJ	ENSMSPG00010051614	pseudogene	Chr19:2968037-2968364 (-)
WSB/EiJ	ENSIUOG00005050974	pseudogene	Chr19:2887318-2887645 (-)

Homology

• Gene Tree
  Gm19505
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  2

• Ensembl
  ENSMUSG00000118194 (Evidence)
• NCBI Gene
  100503014

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118194	Ensembl Gene Model | MGI Sequence Detail	328	C57BL/6J
transcript	ENSMUST00000236073	Ensembl | MGI Sequence Detail	328	Not Applicable
polypeptide	XP_036017631	RefSeq | MGI Sequence Detail	110	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;