Gm19465 Pseudogene Detail

Summary

• Symbol
  Gm19465
• Name
  predicted gene, 19465

• Feature Type
  pseudogene
• IDs
  MGI:5011650
  NCBI Gene: 100502944
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:50234620-50238777 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 25.86 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  383 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011650	pseudogene	Chr17:50234620-50248574 (+)
129S1/SvImJ	ENSMUSG00200028502	pseudogene	Chr17:45439665-45453483 (+)
A/J	ENSMUSG00195022312	pseudogene	Chr17:46927085-46940919 (+)
AKR/J	ENSMUSG00220038796	pseudogene	Chr17:45927107-45940942 (+)
BALB/cJ	ENSMUSG00180026808	pseudogene	Chr17:46683356-46697189 (+)
C3H/HeJ	ENSMUSG00175016917	pseudogene	Chr17:45990788-46004620 (+)
C57BL/6NJ	ENSMUSG00215036246	pseudogene	Chr17:45559620-45573440 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005026270	pseudogene	Chr17:46735596-46749434 (+)
CBA/J	ENSMUSG00210038893	pseudogene	Chr17:45740348-45754181 (+)
DBA/2J	ENSMUSG00185030017	pseudogene	Chr17:48639460-48653293 (+)
FVB/NJ	ENSMUSG00205053366	pseudogene	Chr17:46210835-46223996 (+)
JF1/MsJ	ENSUMUG00000038579	pseudogene	Chr17:48325949-48339359 (+)
LP/J	ENSMUSG00230041990	pseudogene	Chr17:49551165-49564981 (+)
NOD/ShiLtJ	ENSMUSG00190018930	pseudogene	Chr17:45720394-45734215 (+)
NZO/HlLtJ	ENSMUSG00225043720	pseudogene	Chr17:51786469-51800283 (+)
PWK/PhJ	ENSLUMG00010035959	pseudogene	Chr17:45555566-45569262 (+)
SPRET/EiJ	ENSMSPG00010039391	pseudogene	Chr17:45758038-45771915 (+)
WSB/EiJ	ENSIUOG00005028473	pseudogene	Chr17:46592468-46605617 (+)

Homology

• Gene Tree
  Gm19465
  

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000118549 (Evidence)
• NCBI Gene
  100502944

Representative Sequences			Length	Strain/Species
genomic	100502944	NCBI Gene Model | MGI Sequence Detail	4158	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;