Gm19434 Gene Detail

Summary

• Symbol
  Gm19434
• Name
  predicted gene, 19434

• Feature Type
  lncRNA gene
• IDs
  MGI:5011619
  NCBI Gene: 100502888
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:135165478-135171957 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 66.00 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  363 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011619	lncRNA gene	Chr6:135165478-135171958 (+)
129S1/SvImJ	ENSMUSG00200034287	lncRNA gene	Chr6:132665647-132672157 (+)
A/J	ENSMUSG00195032464	lncRNA gene	Chr6:131519728-131526293 (+)
AKR/J	ENSMUSG00220042797	lncRNA gene	Chr6:129744156-129750721 (+)
BALB/cJ	ENSMUSG00180039059	lncRNA gene	Chr6:131597868-131604406 (+)
C3H/HeJ	ENSMUSG00175042758	lncRNA gene	Chr6:131540099-131546662 (+)
C57BL/6NJ	ENSMUSG00215033773	lncRNA gene	Chr6:131788315-131794795 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003949	antisense lncRNA gene	Chr6:133175936-133181562 (+)
CAST/EiJ	ENSTCUG00005041182	lncRNA gene	Chr6:132458089-132464669 (+)
CBA/J	ENSMUSG00210016680	lncRNA gene	Chr6:131558493-131565058 (+)
DBA/2J	ENSMUSG00185022816	lncRNA gene	Chr6:132254725-132261288 (+)
FVB/NJ	ENSMUSG00205043466	lncRNA gene	Chr6:130688550-130695093 (+)
JF1/MsJ	ENSUMUG00000045240	lncRNA gene	Chr6:131004703-131011183 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190006776	lncRNA gene	Chr6:132092943-132099508 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010043044	lncRNA gene	Chr6:130060836-130067315 (+)
SPRET/EiJ	ENSMSPG00010035693	lncRNA gene	Chr6:133853600-133860198 (+)
WSB/EiJ	ENSIUOG00005045696	lncRNA gene	Chr6:132361001-132367516 (+)

Homology

• Gene Tree
  Gm19434
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  6
• Gene trapped
  6
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000108239 (Evidence)
• NCBI Gene
  100502888

Representative Sequences			Length	Strain/Species
genomic	100502888	NCBI Gene Model | MGI Sequence Detail	6480	C57BL/6J
transcript	NR_040296	RefSeq | MGI Sequence Detail	2572	ZRU/MplStud

Molecular
Reagents

• All nucleic 3

  cDNA 3

References

• Summaries
  All 8

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14